RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 C2CD3Q4AC94 2353 aa11.78□□□□□ -0.52
ACTB-213ENST00000493945 PLXNB1O43157 2135 aa11.77□□□□□ -0.52
ACTB-213ENST00000493945 TRAV3A0A0B4J244 114 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 A0A0G2JRQ6 117 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 TMEM89A2RUT3 159 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 NPIPB5A8MRT5 1133 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 SCAF4O95104 1147 aaKnown RBP11.77□□□□□ -0.53
ACTB-213ENST00000493945 SCGB1D2O95969 90 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 OPN1MWP04001 364 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 RLN2P04090 185 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 OPN1MW2P0DN77 364 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 OPN1MW3P0DN78 364 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 DEFA4P12838 97 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 HIST1H1BP16401 226 aaKnown RBP11.77□□□□□ -0.53
ACTB-213ENST00000493945 ATP5IP56385 69 aaPredicted RBP11.77□□□□□ -0.53
ACTB-213ENST00000493945 PDLIM3Q53GG5 364 aaPredicted RBP11.77□□□□□ -0.53
ACTB-213ENST00000493945 TEX38Q6PEX7 206 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 TMEM65Q6PI78 240 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.77□□□□□ -0.53
ACTB-213ENST00000493945 ZBTB8BQ8NAP8 495 aaPredicted RBP11.77□□□□□ -0.53
ACTB-213ENST00000493945 LFNGQ8NES3 379 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 NMES1Q9C002 83 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 SLA2Q9H6Q3 261 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 HEYLQ9NQ87 328 aaPredicted RBP11.77□□□□□ -0.53
ACTB-213ENST00000493945 NDUFA4L2Q9NRX3 87 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 HSPB7Q9UBY9 170 aa11.77□□□□□ -0.53
ACTB-213ENST00000493945 INS-IGF2F8WCM5 200 aa11.76□□□□□ -0.53
ACTB-213ENST00000493945 L7N2F9 121 aa11.76□□□□□ -0.53
ACTB-213ENST00000493945 CORTO00230 105 aa11.76□□□□□ -0.53
ACTB-213ENST00000493945 CCSO14618 274 aa11.76□□□□□ -0.53
ACTB-213ENST00000493945 VAMP2P63027 116 aa11.76□□□□□ -0.53
ACTB-213ENST00000493945 NDPQ00604 133 aa11.76□□□□□ -0.53
ACTB-213ENST00000493945 IZUMO4Q1ZYL8 232 aa11.76□□□□□ -0.53
ACTB-213ENST00000493945 CXorf66Q5JRM2 361 aaPredicted RBP11.76□□□□□ -0.53
ACTB-213ENST00000493945 C10orf55Q5SWW7 151 aa11.76□□□□□ -0.53
ACTB-213ENST00000493945 LINC01006Q8NI28 216 aa11.76□□□□□ -0.53
ACTB-213ENST00000493945 FAM110DQ8TAY7 271 aaPredicted RBP11.76□□□□□ -0.53
ACTB-213ENST00000493945 DTD1Q8TEA8 209 aa11.76□□□□□ -0.53
ACTB-213ENST00000493945 RBMXL1Q96E39 390 aaKnown RBP11.76□□□□□ -0.53
ACTB-213ENST00000493945 FAM103A1Q9BTL3 118 aaKnown RBP11.76□□□□□ -0.53
ACTB-213ENST00000493945 ZNF355PQ9NSJ1 428 aa11.76□□□□□ -0.53
ACTB-213ENST00000493945 SYNGR2O43760 224 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 PITX3O75364 302 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 ELANEP08246 267 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 OR13C7P0DN81 318 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 HTR2BP41595 481 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 FGL1Q08830 312 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 FAM209BQ5JX69 171 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 PRIMA1Q86XR5 153 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 TTC9CQ8N5M4 171 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 KLHDC1Q8N7A1 406 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 RAB40CQ96S21 281 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 SERTAD4Q9NUC0 356 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 U3KQ87 197 aa11.75□□□□□ -0.53
ACTB-213ENST00000493945 SETD2Q9BYW2 2564 aaPredicted RBP11.74□□□□□ -0.53
ACTB-213ENST00000493945 TET2Q6N021 2002 aaPredicted RBP11.74□□□□□ -0.53
ACTB-213ENST00000493945 SCGB2A1O75556 95 aa11.74□□□□□ -0.53
ACTB-213ENST00000493945 PSMB6P28072 239 aa11.74□□□□□ -0.53
ACTB-213ENST00000493945 S100A10P60903 97 aa11.74□□□□□ -0.53
ACTB-213ENST00000493945 FOXE3Q13461 319 aa11.74□□□□□ -0.53
ACTB-213ENST00000493945 MRGPRG-AS1Q2M3A8 158 aa11.74□□□□□ -0.53
ACTB-213ENST00000493945 TMEM95Q3KNT9 176 aa11.74□□□□□ -0.53
ACTB-213ENST00000493945 Q6ZRM9 215 aa11.74□□□□□ -0.53
ACTB-213ENST00000493945 OR4D5Q8NGN0 318 aa11.74□□□□□ -0.53
ACTB-213ENST00000493945 OR10C1Q96KK4 312 aa11.74□□□□□ -0.53
ACTB-213ENST00000493945 C19orf24Q9BVV8 132 aa11.74□□□□□ -0.53
ACTB-213ENST00000493945 WSB1Q9Y6I7 421 aa11.74□□□□□ -0.53
ACTB-213ENST00000493945 A0A0G2JLM5 398 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 IGLC7A0M8Q6 106 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 TEX22C9J3V5 150 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 HAX1O00165 279 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 NXPH3O95157 252 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 GIPP09681 153 aaPredicted RBP11.73□□□□□ -0.53
ACTB-213ENST00000493945 MDKP21741 143 aaPredicted RBP11.73□□□□□ -0.53
ACTB-213ENST00000493945 RAB11AP62491 216 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 RPL23AP62750 156 aaKnown RBP11.73□□□□□ -0.53
ACTB-213ENST00000493945 SSBP2P81877 361 aaPredicted RBP11.73□□□□□ -0.53
ACTB-213ENST00000493945 Q6ZNX1 250 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 OR2C3Q8N628 320 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 ZNF114Q8NC26 417 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 SLC24A4Q8NFF2 622 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 OR1P1Q8NH06 330 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 NOL4LQ96MY1 436 aaPredicted RBP11.73□□□□□ -0.53
ACTB-213ENST00000493945 WNT10AQ9GZT5 417 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 RBKSQ9H477 322 aa11.73□□□□□ -0.53
ACTB-213ENST00000493945 RPS10-NUDT3A0A1W2PQS6 291 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 HMX3A6NHT5 357 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 FAM223BA6NKX1 122 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 SSSCA1O60232 199 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 FBXO24O75426 580 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 BRI3O95415 125 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 IFNA10P01566 189 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 IGHG4P01861 327 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 CRYGCP07315 174 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 PF4V1P10720 104 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 CTRB1P17538 263 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 TAS2R30P59541 319 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 RAP2BP61225 183 aa11.72□□□□□ -0.53
ACTB-213ENST00000493945 SRSF2Q01130 221 aaKnown RBP11.72□□□□□ -0.53
ACTB-213ENST00000493945 ID3Q02535 119 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms