RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 C17orf100A8MU93 164 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 ACSM6Q6P461 480 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 DPPA3Q6W0C5 159 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 ZNF788Q6ZQV5 615 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 TAF15Q92804 592 aaKnown RBP eCLIP11.36□□□□□ -0.59
VCP-207ENST00000493886 IFI27L2Q9H2X8 130 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 SEC14L6B5MCN3 397 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 M0R1X1 148 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 TNFRSF1AP19438 455 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 COMPP49747 757 aaPredicted RBP11.36□□□□□ -0.59
VCP-207ENST00000493886 RPL39P5Q59GN2 51 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 TMEM14EPQ6UXP3 125 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 RAB9BQ9NP90 201 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 TRGV10A0A0A0MS01 117 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 KBTBD11-OT1A0A1B0GTJ5 212 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 CLDN34H7C241 214 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 FCGR3BO75015 233 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 TFF3Q07654 80 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 TMEM41BQ5BJD5 291 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 TEX36Q5VZQ5 186 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 ZCCHC24Q8N2G6 241 aaKnown RBP11.35□□□□□ -0.59
VCP-207ENST00000493886 FAM216BQ8N7L0 139 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 WFIKKN1Q96NZ8 548 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 FAM234AQ9H0X4 552 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 HIPK2Q9H2X6 1198 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 TRAV1-1A0A0B4J248 108 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 ZG16O60844 167 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 UTF1Q5T230 341 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 PRSS57Q6UWY2 283 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 SDF2L1Q9HCN8 221 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 TANC2Q9HCD6 1990 aa11.35□□□□□ -0.59
VCP-207ENST00000493886 CD81P60033 236 aa11.34□□□□□ -0.59
VCP-207ENST00000493886 TCF23Q7RTU1 214 aa11.34□□□□□ -0.59
VCP-207ENST00000493886 HIST3H2BBQ8N257 126 aa11.34□□□□□ -0.59
VCP-207ENST00000493886 OR5R1Q8NH85 324 aa11.34□□□□□ -0.59
VCP-207ENST00000493886 LEAP2Q969E1 77 aa11.34□□□□□ -0.59
VCP-207ENST00000493886 VKORC1Q9BQB6 163 aa11.34□□□□□ -0.59
VCP-207ENST00000493886 VAX2Q9UIW0 290 aa11.34□□□□□ -0.59
VCP-207ENST00000493886 SMCO3A2RU48 225 aa11.34□□□□□ -0.59
VCP-207ENST00000493886 HPRT1P00492 218 aa11.34□□□□□ -0.59
VCP-207ENST00000493886 RAB7AP51149 207 aa11.34□□□□□ -0.59
VCP-207ENST00000493886 SCGB2A2Q13296 93 aa11.34□□□□□ -0.59
VCP-207ENST00000493886 PSMG3Q9BT73 122 aaPredicted RBP11.34□□□□□ -0.59
VCP-207ENST00000493886 AURKAIP1Q9NWT8 199 aaPredicted RBP11.34□□□□□ -0.59
VCP-207ENST00000493886 TLN1Q9Y490 2541 aaKnown RBP11.34□□□□□ -0.59
VCP-207ENST00000493886 MC5RP33032 325 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 ZNF705AQ6ZN79 300 aaPredicted RBP11.33□□□□□ -0.6
VCP-207ENST00000493886 C16orf82Q7Z2V1 217 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 MBD3L1Q8WWY6 194 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 RAXQ9Y2V3 346 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 TRGV8A0A0C4DH27 118 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 K7EP13 123 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 RPL19P84098 196 aaKnown RBP11.33□□□□□ -0.6
VCP-207ENST00000493886 CT45A1Q5HYN5 189 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 DNLZQ5SXM8 178 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 OR4F5Q8NH21 305 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 CT45A3Q8NHU0 189 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 OR4F4Q96R69 305 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 NGBQ9NPG2 151 aa11.33□□□□□ -0.6
VCP-207ENST00000493886 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.6
VCP-207ENST00000493886 OR9G9P0C7N8 305 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 UCNP55089 124 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 MEF2BQ02080 365 aaPredicted RBP11.32□□□□□ -0.6
VCP-207ENST00000493886 C1orf229Q6ZS94 237 aaPredicted RBP11.32□□□□□ -0.6
VCP-207ENST00000493886 CIB3Q96Q77 187 aaPredicted RBP11.32□□□□□ -0.6
VCP-207ENST00000493886 GZMBP10144 247 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 SERF2P84101 59 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 ST6GALNAC3Q8NDV1 305 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 S1PR3Q99500 378 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 SAP30LQ9HAJ7 183 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 IDI2-AS1Q9NZ38 188 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 TMPRSS2O15393 492 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 IFNA1P01562 189 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 NBEAP1P0C6P0 100 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 RIPPLY3P57055 190 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 PNRC1Q12796 327 aaPredicted RBP11.32□□□□□ -0.6
VCP-207ENST00000493886 FFAR4Q5NUL3 377 aa11.32□□□□□ -0.6
VCP-207ENST00000493886 QTRT1Q9BXR0 403 aaKnown RBP11.32□□□□□ -0.6
VCP-207ENST00000493886 TRAV38-1A0A0B4J264 116 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 B4DEV8 164 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 BRS3P32247 399 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 KIR2DS2P43631 304 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 SELENOTP62341 195 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 GCSAMLQ5JQS6 135 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 PRAMEF5Q5TYX0 476 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 OR10G4Q8NGN3 311 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 OR10G9Q8NGN4 311 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 OR10G7Q8NGN6 311 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 SAA2-SAA4A0A096LPE2 208 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 ZNF320A2RRD8 509 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 FAM90A9PA6NNJ1 464 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 PMS2P5A8MQ11 134 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 SHISA9B4DS77 424 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 SAA2P0DJI9 122 aaPredicted RBP11.31□□□□□ -0.6
VCP-207ENST00000493886 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.31□□□□□ -0.6
VCP-207ENST00000493886 DDB2Q92466 427 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 PARLQ9H300 379 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 LINC00574Q9H8X3 128 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 ZFP30Q9Y2G7 519 aa11.31□□□□□ -0.6
VCP-207ENST00000493886 ERVK-16P61578 105 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms