RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 OR1L8Q8NGR8 309 aa13.96□□□□□ -0.17
PDLIM7-208ENST00000493815 CACNG5Q9UF02 275 aa13.96□□□□□ -0.17
PDLIM7-208ENST00000493815 TRRAPQ9Y4A5 3859 aa13.96□□□□□ -0.18
PDLIM7-208ENST00000493815 A0A0B4J2A0 478 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 FOXE3Q13461 319 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 ALX4Q9H161 411 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 NDUFA4L2Q9NRX3 87 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 COA4Q9NYJ1 87 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 SHPKQ9UHJ6 478 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 ST8SIA3O43173 380 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 NXPH3O95157 252 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 FGF2P09038 288 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 HOXB5P09067 269 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 NMSQ5H8A3 153 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 CXorf66Q5JRM2 361 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 TMEM65Q6PI78 240 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 LSM10Q969L4 123 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 FKBP11Q9NYL4 201 aa13.95□□□□□ -0.18
PDLIM7-208ENST00000493815 TET2Q6N021 2002 aaPredicted RBP13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 IGLC7A0M8Q6 106 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 ADARB2-AS1A8MUL3 147 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 DUS4LO95620 317 aaKnown RBP13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 ELANEP08246 267 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 TRAPPC2P0DI81 140 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 TRAPPC2BP0DI82 140 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 RAB9AP51151 201 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 WT1-ASQ06250 92 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 PLET1Q6UQ28 207 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 FAM219AQ8IW50 185 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 COMMD1Q8N668 190 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 LRTM2Q8N967 370 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 OR5M8Q8NGP6 311 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 OR5B3Q8NH48 314 aa13.94□□□□□ -0.18
PDLIM7-208ENST00000493815 ADAP1O75689 374 aa13.93□□□□□ -0.18
PDLIM7-208ENST00000493815 MECP2P51608 486 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-208ENST00000493815 TTC9CQ8N5M4 171 aa13.93□□□□□ -0.18
PDLIM7-208ENST00000493815 FAM110DQ8TAY7 271 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-208ENST00000493815 TMEM68Q96MH6 324 aa13.93□□□□□ -0.18
PDLIM7-208ENST00000493815 TSSC4Q9Y5U2 329 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-208ENST00000493815 IFNA17P01571 189 aa13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 OR13C7P0DN81 318 aa13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 TPPP2P59282 170 aa13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 HSPE1P61604 102 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 KIAA0141Q14154 515 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 ZNF429Q86V71 674 aa13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 RNF152Q8N8N0 203 aa13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 UXS1Q8NBZ7 420 aa13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 COQ8AQ8NI60 647 aa13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 OR5B12Q96R08 314 aa13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 ZNF257Q9Y2Q1 563 aa13.92□□□□□ -0.18
PDLIM7-208ENST00000493815 MPTX1A8MV57 137 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 INMT-MINDY4F8WBC2 141 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 TRGV3P03979 118 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 SULT1A3P0DMM9 295 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 SULT1A4P0DMN0 295 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 PSMB6P28072 239 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 RPL23AP62750 156 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 DCTN2Q13561 401 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 GGNBP1Q5YKI7 109 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 NDUFA11Q86Y39 141 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 ZNF431Q8TF32 576 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 MITD1Q8WV92 249 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 VWFP04275 2813 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 PRCDQ00LT1 54 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 MARVELD1Q9BSK0 173 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 PALMDQ9NP74 551 aa13.91□□□□□ -0.18
PDLIM7-208ENST00000493815 DUXBA0A1W2PPF3 345 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 NPIPB5A8MRT5 1133 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 NUDT19A8MXV4 375 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 IGHV3-11P01762 117 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 CTRB1P17538 263 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 SMCO1Q147U7 214 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 C11orf87Q6NUJ2 197 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 ZNF491Q8N8L2 437 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 KLHL30-AS1Q8NEE0 82 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 MYOZ3Q8TDC0 251 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 PDCD10Q9BUL8 212 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 GNB4Q9HAV0 340 aa13.9□□□□□ -0.18
PDLIM7-208ENST00000493815 TSPAN15O95858 294 aa13.89□□□□□ -0.19
PDLIM7-208ENST00000493815 CRYGCP07315 174 aa13.89□□□□□ -0.19
PDLIM7-208ENST00000493815 DEFA4P12838 97 aa13.89□□□□□ -0.19
PDLIM7-208ENST00000493815 DEFB136Q30KP8 78 aa13.89□□□□□ -0.19
PDLIM7-208ENST00000493815 C8orf86Q6ZUL3 223 aa13.89□□□□□ -0.19
PDLIM7-208ENST00000493815 DUX3Q96PT4 197 aa13.89□□□□□ -0.19
PDLIM7-208ENST00000493815 PLEKHA3Q9HB20 300 aa13.89□□□□□ -0.19
PDLIM7-208ENST00000493815 ZFP57Q9NU63 452 aa13.89□□□□□ -0.19
PDLIM7-208ENST00000493815 TMED3Q9Y3Q3 217 aa13.89□□□□□ -0.19
PDLIM7-208ENST00000493815 DMRT1Q9Y5R6 373 aa13.89□□□□□ -0.19
PDLIM7-208ENST00000493815 A0A1B0GU03 582 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 CCSO14618 274 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 OR2J3O76001 311 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 PTTG1O95997 202 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 RHOGP84095 191 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 AARDQ4LEZ3 155 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 OR1S1Q8NH92 325 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 FANCD2OSQ96PS1 177 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 SRSF8Q9BRL6 282 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 SLA2Q9H6Q3 261 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms