RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 TMEM61Q8N0U2 210 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 UXS1Q8NBZ7 420 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 ZNF502Q8TBZ5 544 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 CXorf58Q96LI9 332 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 HINT2Q9BX68 163 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 QTRT1Q9BXR0 403 aaKnown RBP11.01□□□□□ -0.65
ATG4B-223ENST00000493618 HIPK2Q9H2X6 1198 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 COMMD9Q9P000 198 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 KLK9Q9UKQ9 250 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 A0A087WXM4 84 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 KRASP01116 189 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 TRAPPC2P0DI81 140 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 TRAPPC2BP0DI82 140 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 OR13C7P0DN81 318 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 NAT1P18440 290 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 F2RP25116 425 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 PRSS3P35030 304 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 HRH1P35367 487 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 G6PCP35575 357 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 TAS2R46P59540 309 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 NCS1P62166 190 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 WT1-ASQ06250 92 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 SLC25A24Q6NUK1 477 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 LYSMD2Q8IV50 215 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 CD300LFQ8TDQ1 290 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 FCAMRQ8WWV6 532 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 VCX3AQ9NNX9 186 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 COMMD3Q9UBI1 195 aa11□□□□□ -0.65
ATG4B-223ENST00000493618 MARCH11A6NNE9 402 aa10.99□□□□□ -0.65
ATG4B-223ENST00000493618 A8MWP6 167 aa10.99□□□□□ -0.65
ATG4B-223ENST00000493618 MFAP2P55001 183 aa10.99□□□□□ -0.65
ATG4B-223ENST00000493618 ZNF585BQ52M93 769 aa10.99□□□□□ -0.65
ATG4B-223ENST00000493618 PHLDA2Q53GA4 152 aa10.99□□□□□ -0.65
ATG4B-223ENST00000493618 PLET1Q6UQ28 207 aa10.99□□□□□ -0.65
ATG4B-223ENST00000493618 OR52B4Q8NGK2 314 aa10.99□□□□□ -0.65
ATG4B-223ENST00000493618 BORCS5Q969J3 196 aa10.99□□□□□ -0.65
ATG4B-223ENST00000493618 SLC25A46Q96AG3 418 aa10.99□□□□□ -0.65
ATG4B-223ENST00000493618 DGCR14Q96DF8 476 aaKnown RBP10.99□□□□□ -0.65
ATG4B-223ENST00000493618 OR51B2Q9Y5P1 312 aa10.99□□□□□ -0.65
ATG4B-223ENST00000493618 DNAH1Q9P2D7 4330 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 LCE6AA0A183 80 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 OR2T8A6NH00 312 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 GPR31O00270 319 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 TNFAIP8O95379 198 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 SERPINE2P07093 398 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 VBP1P61758 197 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 RNASE12Q5GAN4 147 aaKnown RBP10.98□□□□□ -0.65
ATG4B-223ENST00000493618 SLC16A13Q7RTY0 426 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 SNX29P2Q8IUI4 249 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 GDPD1Q8N9F7 314 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 OR1L8Q8NGR8 309 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 OR6F1Q8NGZ6 308 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 SRSF8Q9BRL6 282 aaKnown RBP10.98□□□□□ -0.65
ATG4B-223ENST00000493618 FUNDC2Q9BWH2 189 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 THYN1Q9P016 225 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 HYDINQ4G0P3 5121 aa10.98□□□□□ -0.65
ATG4B-223ENST00000493618 IGHV3OR16-8A0A075B7F1 116 aa10.97□□□□□ -0.65
ATG4B-223ENST00000493618 DBX1A6NMT0 343 aa10.97□□□□□ -0.65
ATG4B-223ENST00000493618 TGOLN2O43493 480 aa10.97□□□□□ -0.65
ATG4B-223ENST00000493618 HPGDSO60760 199 aa10.97□□□□□ -0.65
ATG4B-223ENST00000493618 PTBP1P26599 531 aaKnown RBP eCLIP10.97□□□□□ -0.656e-9■■■■□ 20.1
ATG4B-223ENST00000493618 TSPAN5P62079 268 aa10.97□□□□□ -0.65
ATG4B-223ENST00000493618 CMTM1Q8IZ96 169 aa10.97□□□□□ -0.65
ATG4B-223ENST00000493618 GPX8Q8TED1 209 aa10.97□□□□□ -0.65
ATG4B-223ENST00000493618 NDUFA4L2Q9NRX3 87 aa10.97□□□□□ -0.65
ATG4B-223ENST00000493618 CYB5BO43169 146 aa10.96□□□□□ -0.65
ATG4B-223ENST00000493618 ZNF207O43670 478 aaKnown RBP10.96□□□□□ -0.65
ATG4B-223ENST00000493618 SNAPC5O75971 98 aa10.96□□□□□ -0.65
ATG4B-223ENST00000493618 ELK1P19419 428 aa10.96□□□□□ -0.65
ATG4B-223ENST00000493618 THOC7Q6I9Y2 204 aaKnown RBP10.96□□□□□ -0.65
ATG4B-223ENST00000493618 RBPMS2Q6ZRY4 209 aaKnown RBP10.96□□□□□ -0.65
ATG4B-223ENST00000493618 UBAC2Q8NBM4 344 aa10.96□□□□□ -0.65
ATG4B-223ENST00000493618 VN1R17PQ8TDU5 208 aa10.96□□□□□ -0.65
ATG4B-223ENST00000493618 LSM10Q969L4 123 aaKnown RBP10.96□□□□□ -0.65
ATG4B-223ENST00000493618 ZNF436Q9C0F3 470 aaPredicted RBP10.96□□□□□ -0.65
ATG4B-223ENST00000493618 UBQLN2Q9UHD9 624 aa10.96□□□□□ -0.65
ATG4B-223ENST00000493618 UFC1Q9Y3C8 167 aa10.96□□□□□ -0.65
ATG4B-223ENST00000493618 F11RQ9Y624 299 aaKnown RBP10.96□□□□□ -0.65
ATG4B-223ENST00000493618 SMIM31A0A1B0GVY4 71 aa10.95□□□□□ -0.66
ATG4B-223ENST00000493618 M0QYG6 137 aa10.95□□□□□ -0.66
ATG4B-223ENST00000493618 APOA1P02647 267 aa10.95□□□□□ -0.66
ATG4B-223ENST00000493618 FGF2P09038 288 aa10.95□□□□□ -0.66
ATG4B-223ENST00000493618 C8orf88P0DMB2 117 aa10.95□□□□□ -0.66
ATG4B-223ENST00000493618 TBC1D26Q86UD7 250 aa10.95□□□□□ -0.66
ATG4B-223ENST00000493618 SCARB1Q8WTV0 552 aa10.95□□□□□ -0.66
ATG4B-223ENST00000493618 CHRDL1Q9BU40 450 aa10.95□□□□□ -0.66
ATG4B-223ENST00000493618 C20orf24Q9BUV8 137 aa10.95□□□□□ -0.66
ATG4B-223ENST00000493618 MRPL27Q9P0M9 148 aaKnown RBP10.95□□□□□ -0.66
ATG4B-223ENST00000493618 Q56UQ5 140 aa10.94□□□□□ -0.66
ATG4B-223ENST00000493618 HSD17B13Q7Z5P4 300 aaPredicted RBP10.94□□□□□ -0.66
ATG4B-223ENST00000493618 OR1L6Q8NGR2 347 aa10.94□□□□□ -0.66
ATG4B-223ENST00000493618 TMEM190Q8WZ59 177 aa10.94□□□□□ -0.66
ATG4B-223ENST00000493618 MARC2Q969Z3 335 aa10.94□□□□□ -0.66
ATG4B-223ENST00000493618 GGTLC1Q9BX51 225 aa10.94□□□□□ -0.66
ATG4B-223ENST00000493618 NAA50Q9GZZ1 169 aaKnown RBP10.94□□□□□ -0.66
ATG4B-223ENST00000493618 C21orf62Q9NYP8 219 aa10.94□□□□□ -0.66
ATG4B-223ENST00000493618 PRNDQ9UKY0 176 aa10.94□□□□□ -0.66
ATG4B-223ENST00000493618 ALMS1Q8TCU4 4167 aa10.93□□□□□ -0.66
ATG4B-223ENST00000493618 PLECQ15149 4684 aaKnown RBP10.93□□□□□ -0.66
ATG4B-223ENST00000493618 LOC102724200A0A096LPH7 203 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms