RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 C4orf3Q8WVX3 66 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 IL22RA2Q969J5 263 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 LSM10Q969L4 123 aaKnown RBP6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 GALNT14Q96FL9 552 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 SEC22AQ96IW7 307 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 USMG5Q96IX5 58 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 OR5B12Q96R08 314 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 SRSF8Q9BRL6 282 aaKnown RBP6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 GPR61Q9BZJ8 451 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 PLEKHA3Q9HB20 300 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 ZNF257Q9Y2Q1 563 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 NSG2Q9Y328 171 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 TRAV3A0A0B4J244 114 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 TEX50A0A1B0GTY4 177 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 FAM223BA6NKX1 122 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 NPIPB5A8MRT5 1133 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 NDUFB6O95139 128 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 CDS2O95674 445 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 TSPAN15O95858 294 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 IFNA21P01568 189 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 IGHV3-11P01762 117 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 HLA-AP01891 365 aaKnown RBP6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 REG1AP05451 166 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 OR8U8P0C7N1 319 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 OR13C7P0DN81 318 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 EGR2P11161 476 aaPredicted RBP6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 PSMB6P28072 239 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 SNCAP37840 140 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 MYCNOSP40205 109 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 HSPE1P61604 102 aaKnown RBP6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 ATP5G2Q06055 141 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 TCTEX1D4Q5JR98 221 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 FAM223AQ8IWN6 122 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 ZNF491Q8N8L2 437 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 RNF152Q8N8N0 203 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 OR11H1Q8NG94 326 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 OR1S1Q8NH92 325 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 GLYATL2Q8WU03 294 aa6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 SDHCQ99643 169 aaPredicted RBP6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.35□□□□□ -1.39
TM4SF1-204ENST00000493348 A0A0B4J2A0 478 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 DUXBA0A1W2PPF3 345 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 CEBPZOSA8MTT3 80 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 LINC01619G3V211 115 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 CCL24O00175 119 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 UPK1BO75841 260 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 SFT2D2O95562 160 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 IGKV1-39P01597 117 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 IGKV1D-39P04432 117 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 IL6RP08887 468 aaPredicted RBP6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 LGALS1P09382 135 aaKnown RBP6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 SULT1A3P0DMM9 295 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 SULT1A4P0DMN0 295 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 RHOGP84095 191 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 ZNF616Q08AN1 781 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 TMEM187Q14656 261 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 TATDN3Q17R31 274 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 SLC25A24Q6NUK1 477 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 ZNF429Q86V71 674 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 SELENOHQ8IZQ5 122 aaKnown RBP6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 NECAP1Q8NC96 275 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 OR1N2Q8NGR9 330 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 TMEM230Q96A57 120 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 EEF1AKMT3Q96AZ1 226 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 MCRIP2Q9BUT9 160 aaKnown RBP6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 C20orf85Q9H1P6 137 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 KLK15Q9H2R5 256 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 HIPK2Q9H2X6 1198 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 RANGRFQ9HD47 186 aaPredicted RBP6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 TMEM14BQ9NUH8 114 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 SHPKQ9UHJ6 478 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 FBXL7Q9UJT9 491 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 TMEM56-RWDD3S4R434 201 aa6.34□□□□□ -1.39
TM4SF1-204ENST00000493348 DNHD1Q96M86 4753 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 TRAV6A0A075B6T7 132 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 ANKRD34BA5PLL1 514 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 TEX22C9J3V5 150 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 SOX15O60248 233 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 SCGB2A1O75556 95 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 OR2J3O76001 311 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 BRI3O95415 125 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 DUS4LO95620 317 aaKnown RBP6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 IGKV1-5P01602 117 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 PRH1P02810 166 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 TCRBP04435 133 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 HSPB1P04792 205 aaKnown RBP6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 H2AFB2P0C5Z0 115 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 OR4E1P0C645 316 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 MYOD1P15172 320 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 AREGP15514 252 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 ZP3P21754 424 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 SMCPP49901 116 aaPredicted RBP6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 SPCS3P61009 180 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 SSBP2P81877 361 aaPredicted RBP6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 PRCDQ00LT1 54 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 ASAH1Q13510 395 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 PPP1R1AQ13522 171 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 EXOSC2Q13868 293 aaKnown RBP6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 SMCO1Q147U7 214 aa6.33□□□□□ -1.4
TM4SF1-204ENST00000493348 MRGPRG-AS1Q2M3A8 158 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms