RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 IGKV1-39P01597 117 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 IGKV1D-39P04432 117 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 PI3P19957 117 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 ADMP35318 185 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 VBP1P61758 197 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 ARL6IP1Q15041 203 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 SLC25A24Q6NUK1 477 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 GPHB5Q86YW7 130 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 SNX29P2Q8IUI4 249 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 UBAC2Q8NBM4 344 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 OR52B4Q8NGK2 314 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 VSTM2AQ8TAG5 236 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 GIMAP1Q8WWP7 306 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 IFT46Q9NQC8 304 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 DIABLOQ9NR28 239 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 COMMD3Q9UBI1 195 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 ANAPC10Q9UM13 185 aa6.64□□□□□ -1.35
HDAC3-211ENST00000491581 IGKV3-7A0A075B6H7 116 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 M0QYG6 137 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 CREBL2O60519 120 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-211ENST00000491581 HPGDSO60760 199 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 SLC22A5O76082 557 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 HPRT1P00492 218 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 NQO2P16083 231 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 HRH1P35367 487 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 MAS1LP35410 378 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 TAS2R31P59538 309 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 HERV-K104P61576 105 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 TNFRSF9Q07011 255 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 PMS2P11Q13670 270 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 POU2AF1Q16633 256 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 KCTD21Q4G0X4 260 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 UBE2NLQ5JXB2 153 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 TMEM69Q5SWH9 247 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 ZNF57Q68EA5 555 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-211ENST00000491581 SLC25A42Q86VD7 318 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 ALMS1Q8TCU4 4167 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 MOB3AQ96BX8 217 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 OVOL2Q9BRP0 275 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 YTHDF1Q9BYJ9 559 aaKnown RBP6.63□□□□□ -1.35
HDAC3-211ENST00000491581 COMMD5Q9GZQ3 224 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 Q9H521 79 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 SLC2A8Q9NY64 477 aa6.63□□□□□ -1.35
HDAC3-211ENST00000491581 PLECQ15149 4684 aaKnown RBP6.62□□□□□ -1.35
HDAC3-211ENST00000491581 MARCH11A6NNE9 402 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 A8MWP6 167 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 K7EIM0 57 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 TGOLN2O43493 480 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 SCGNO76038 276 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 SERPINE2P07093 398 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 TRAPPC2P0DI81 140 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 TRAPPC2BP0DI82 140 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 RPL35AP18077 110 aaKnown RBP6.62□□□□□ -1.35
HDAC3-211ENST00000491581 ELK1P19419 428 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 TFPI2P48307 235 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 CATR1Q13166 79 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 KLK9Q2XQG4 91 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 ODF3L2Q3SX64 289 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 PLET1Q6UQ28 207 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 DHRS11Q6UWP2 260 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 APRG1Q8IVJ8 170 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 GDPD1Q8N9F7 314 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 TSPAN14Q8NG11 270 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 OR2K2Q8NGT1 345 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 OR5H2Q8NGV7 314 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 SCARB1Q8WTV0 552 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 DGCR14Q96DF8 476 aaKnown RBP6.62□□□□□ -1.35
HDAC3-211ENST00000491581 S100A16Q96FQ6 103 aaKnown RBP6.62□□□□□ -1.35
HDAC3-211ENST00000491581 C20orf24Q9BUV8 137 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 FUNDC2Q9BWH2 189 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 QTRT1Q9BXR0 403 aaKnown RBP6.62□□□□□ -1.35
HDAC3-211ENST00000491581 PLEKHA2Q9HB19 425 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 NDUFA4L2Q9NRX3 87 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 KLK9Q9UKQ9 250 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 OR51B2Q9Y5P1 312 aa6.62□□□□□ -1.35
HDAC3-211ENST00000491581 IGHV3-66A0A0C4DH42 116 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 A0A0J9YWU9 116 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 RBFOX2O43251 390 aaKnown RBP eCLIP6.61□□□□□ -1.35
HDAC3-211ENST00000491581 APOHP02749 345 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-211ENST00000491581 IFNA6P05013 189 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 C8orf88P0DMB2 117 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 NAT1P18440 290 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 F2RP25116 425 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 FCGR2BP31994 310 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-211ENST00000491581 RANBP1P43487 201 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 DEFB135Q30KP9 77 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 FAM106AQ4KMX7 169 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 FAM209BQ5JX69 171 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 GSG1LQ6UXU4 331 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 TBC1D26Q86UD7 250 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 LILRB2Q8N423 598 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 ZBTB34Q8NCN2 500 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 OR4D10Q8NGI6 311 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 OR5B3Q8NH48 314 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 OR4A5Q8NH83 315 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 GPX8Q8TED1 209 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 TMEM190Q8WZ59 177 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 MRGPRFQ96AM1 343 aa6.61□□□□□ -1.35
HDAC3-211ENST00000491581 ZNF436Q9C0F3 470 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-211ENST00000491581 TECRQ9NZ01 308 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms