RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 NEURL2Q9BR09 285 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 SPATA25Q9BR10 227 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 SRSF8Q9BRL6 282 aaKnown RBP6.25□□□□□ -1.41
LSM2-213ENST00000491421 FUNDC2Q9BWH2 189 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 QTRT1Q9BXR0 403 aaKnown RBP6.25□□□□□ -1.41
LSM2-213ENST00000491421 PLEKHA3Q9HB20 300 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 PALMDQ9NP74 551 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 SLC2A8Q9NY64 477 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 TECRQ9NZ01 308 aaKnown RBP6.25□□□□□ -1.41
LSM2-213ENST00000491421 COMMD3Q9UBI1 195 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 RABL2AQ9UBK7 228 aaPredicted RBP6.25□□□□□ -1.41
LSM2-213ENST00000491421 KLK9Q9UKQ9 250 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 DNAH7Q8WXX0 4024 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 SMIM31A0A1B0GVY4 71 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 ZNF785A8K8V0 405 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 A8MWP6 167 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 GPR31O00270 319 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 CYB5BO43169 146 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 APOA1P02647 267 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 CLEC3BP05452 202 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 TRAPPC2P0DI81 140 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 TRAPPC2BP0DI82 140 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 EDN2P20800 178 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 CBLN1P23435 193 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 F2RP25116 425 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 HLA-DMAP28067 261 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 S100GP29377 79 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 GPR183P32249 361 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 LPAR6P43657 344 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 VBP1P61758 197 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 NCS1P62166 190 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 THOC7Q6I9Y2 204 aaKnown RBP6.24□□□□□ -1.41
LSM2-213ENST00000491421 HSD17B13Q7Z5P4 300 aaPredicted RBP6.24□□□□□ -1.41
LSM2-213ENST00000491421 SNX29P2Q8IUI4 249 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 LYSMD2Q8IV50 215 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 OR10W1Q8NGF6 305 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 CACNG8Q8WXS5 425 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 ISOC1Q96CN7 298 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 DGCR14Q96DF8 476 aaKnown RBP6.24□□□□□ -1.41
LSM2-213ENST00000491421 HINT2Q9BX68 163 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 FXYD6Q9H0Q3 95 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 ZC4H2Q9NQZ6 224 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 THYN1Q9P016 225 aa6.24□□□□□ -1.41
LSM2-213ENST00000491421 TNCP24821 2201 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 TEX50A0A1B0GTY4 177 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 TMEM213A2RRL7 107 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 SNAPC5O75971 98 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 KRASP01116 189 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 IFNA6P05013 189 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 CD7P09564 240 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 OR13C7P0DN81 318 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 PTBP1P26599 531 aaKnown RBP eCLIP6.23□□□□□ -1.41
LSM2-213ENST00000491421 RCVRNP35243 200 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 G6PCP35575 357 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 TSPAN5P62079 268 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 WT1-ASQ06250 92 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 PHLDA2Q53GA4 152 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 ZNF57Q68EA5 555 aaPredicted RBP6.23□□□□□ -1.41
LSM2-213ENST00000491421 LPCAT3Q6P1A2 487 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 DEFB125Q8N687 156 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 GDPD1Q8N9F7 314 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 OR1L8Q8NGR8 309 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 ZNF502Q8TBZ5 544 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 GPX8Q8TED1 209 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 FCAMRQ8WWV6 532 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 LSM10Q969L4 123 aaKnown RBP6.23□□□□□ -1.41
LSM2-213ENST00000491421 WDR89Q96FK6 387 aaPredicted RBP6.23□□□□□ -1.41
LSM2-213ENST00000491421 CMTM3Q96MX0 182 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 SCPEP1Q9HB40 452 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 SELENOKQ9Y6D0 94 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 CEPT1Q9Y6K0 416 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 RYR2Q92736 4967 aa6.23□□□□□ -1.41
LSM2-213ENST00000491421 IGHV3-35A0A0C4DH35 117 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 OR11H12B2RN74 326 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 HPGDSO60760 199 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 SERPINE2P07093 398 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 ELK1P19419 428 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 RORCP51449 518 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 ZNF585BQ52M93 769 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 ZFAND6Q6FIF0 208 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 SLC25A24Q6NUK1 477 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 PLET1Q6UQ28 207 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 BTNL8Q6UX41 500 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 UNQ9165/PRO28630Q6UXU0 137 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 SLC16A13Q7RTY0 426 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 TMEM61Q8N0U2 210 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 CADM3Q8N126 398 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 UXS1Q8NBZ7 420 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 VN1R17PQ8TDU5 208 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 TSC22D3Q99576 134 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 WFDC10AQ9H1F0 79 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 SRD5A3Q9H8P0 318 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 EDA2RQ9HAV5 297 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 RETNQ9HD89 108 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 NDUFA4L2Q9NRX3 87 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 MLXQ9UH92 298 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 PRNDQ9UKY0 176 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 NSG2Q9Y328 171 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 UFC1Q9Y3C8 167 aa6.22□□□□□ -1.41
LSM2-213ENST00000491421 OR51B2Q9Y5P1 312 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms