RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	SPAG16	Q8N0X2	631 aa		11.19	□□□□□ -0.62
AGAP3-222	ENST00000490839	NUDCD2	Q8WVJ2	157 aa		11.19	□□□□□ -0.62
AGAP3-222	ENST00000490839	MGLL	Q99685	303 aa		11.19	□□□□□ -0.62
AGAP3-222	ENST00000490839	VCX	Q9H320	206 aa		11.19	□□□□□ -0.62
AGAP3-222	ENST00000490839	ANXA10	Q9UJ72	324 aa		11.19	□□□□□ -0.62
AGAP3-222	ENST00000490839	C15orf62	A8K5M9	175 aa		11.18	□□□□□ -0.62
AGAP3-222	ENST00000490839	UPK2	O00526	184 aa		11.18	□□□□□ -0.62
AGAP3-222	ENST00000490839	TNFSF12	O43508	249 aa		11.18	□□□□□ -0.62
AGAP3-222	ENST00000490839	NQO2	P16083	231 aa		11.18	□□□□□ -0.62
AGAP3-222	ENST00000490839	RAB3B	P20337	219 aa		11.18	□□□□□ -0.62
AGAP3-222	ENST00000490839	MYL9	P24844	172 aa		11.18	□□□□□ -0.62
AGAP3-222	ENST00000490839	ZBTB34	Q8NCN2	500 aa		11.18	□□□□□ -0.62
AGAP3-222	ENST00000490839	CHRDL1	Q9BU40	450 aa		11.18	□□□□□ -0.62
AGAP3-222	ENST00000490839	DUSP21	Q9H596	190 aa		11.18	□□□□□ -0.62
AGAP3-222	ENST00000490839	C21orf62	Q9NYP8	219 aa		11.18	□□□□□ -0.62
AGAP3-222	ENST00000490839	PKHD1	P08F94	4074 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	IGHV3OR16-8	A0A075B7F1	116 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	TRAV3	A0A0B4J244	114 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	TMEM235	A6NFC5	223 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	C11orf94	C9JXX5	98 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	ZNF207	O43670	478 aa	Known RBP	11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	HPRT1	P00492	218 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	SERPINE2	P07093	398 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	GNG2	P59768	71 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	CATR1	Q13166	79 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	ZNF124	Q15973	351 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	SLC25A24	Q6NUK1	477 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	GVQW1	Q8N7I0	195 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	OR10W1	Q8NGF6	305 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	SECTM1	Q8WVN6	248 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	RNF2	Q99496	336 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	TMEM140	Q9NV12	185 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	SMPX	Q9UHP9	88 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	APLN	Q9ULZ1	77 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	ETV7	Q9Y603	341 aa		11.17	□□□□□ -0.62
AGAP3-222	ENST00000490839	SCGN	O76038	276 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	TRAPPC2	P0DI81	140 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	TRAPPC2B	P0DI82	140 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	OR13C7	P0DN81	318 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	MFAP2	P55001	183 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	WT1-AS	Q06250	92 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	PRSS48	Q7RTY5	328 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	OR13F1	Q8NGS4	319 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	CCDC90B	Q9GZT6	254 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	CCL28	Q9NRJ3	127 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	FAT2	Q9NYQ8	4349 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	MUC4	Q99102	2169 aa		11.16	□□□□□ -0.62
AGAP3-222	ENST00000490839	IGHV7-4-1	A0A0J9YVY3	117 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	IGLL5	B9A064	214 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839		F8W735	103 aa	Predicted RBP	11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	SULT1C2	O00338	296 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	SSX5	O60225	188 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	MRPS14	O60783	128 aa	Known RBP	11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	CA1	P00915	261 aa	Predicted RBP	11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	MED14OS	P0DP75	135 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	ARPC4	P59998	168 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	UBAC2	Q8NBM4	344 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	DMBX1	Q8NFW5	382 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	SCARB1	Q8WTV0	552 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	RHPN1-AS1	Q9BWJ2	59 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	HRH4	Q9H3N8	390 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	PLEKHA2	Q9HB19	425 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	COMMD9	Q9P000	198 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	F11R	Q9Y624	299 aa	Known RBP	11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	ABCA13	Q86UQ4	5058 aa		11.15	□□□□□ -0.62
AGAP3-222	ENST00000490839	DNAH17	Q9UFH2	4485 aa		11.15	□□□□□ -0.63
AGAP3-222	ENST00000490839	IGHV3-21	A0A0B4J1V1	117 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839		K7EIM0	57 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	EBAG9	O00559	213 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	CHEK1	O14757	476 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	DEFB4A	O15263	64 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	PPY	P01298	95 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	FCGR2C	P31995	323 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	TFPI2	P48307	235 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	REL	Q04864	619 aa	Predicted RBP	11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	TMEM187	Q14656	261 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839		Q56UQ5	140 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	NR2C2AP	Q86WQ0	139 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	TMEM116	Q8NCL8	245 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	OR1L8	Q8NGR8	309 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	LSM10	Q969L4	123 aa	Known RBP	11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	CMTM3	Q96MX0	182 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	NDUFB11	Q9NX14	153 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	DNAH2	Q9P225	4427 aa		11.14	□□□□□ -0.63
AGAP3-222	ENST00000490839	TEX50	A0A1B0GTY4	177 aa		11.13	□□□□□ -0.63
AGAP3-222	ENST00000490839		A0A1B0GVY2	172 aa		11.13	□□□□□ -0.63
AGAP3-222	ENST00000490839	TRDV1	A0A1B0GX56	115 aa		11.13	□□□□□ -0.63
AGAP3-222	ENST00000490839	TBCE	Q15813	527 aa	Predicted RBP	11.13	□□□□□ -0.63
AGAP3-222	ENST00000490839	ZNF773	Q6PK81	442 aa		11.13	□□□□□ -0.63
AGAP3-222	ENST00000490839	ZNF367	Q7RTV3	350 aa		11.13	□□□□□ -0.63
AGAP3-222	ENST00000490839	BEST4	Q8NFU0	473 aa		11.13	□□□□□ -0.63
AGAP3-222	ENST00000490839	OR10C1	Q96KK4	312 aa		11.13	□□□□□ -0.63
AGAP3-222	ENST00000490839	SLC5A7	Q9GZV3	580 aa		11.13	□□□□□ -0.63
AGAP3-222	ENST00000490839	NDUFA4L2	Q9NRX3	87 aa		11.13	□□□□□ -0.63
AGAP3-222	ENST00000490839	DNAH11	Q96DT5	4516 aa		11.13	□□□□□ -0.63
AGAP3-222	ENST00000490839	C15orf61	A6NNL5	157 aa		11.12	□□□□□ -0.63
AGAP3-222	ENST00000490839	XRCC3	O43542	346 aa		11.12	□□□□□ -0.63
AGAP3-222	ENST00000490839	CTSG	P08311	255 aa		11.12	□□□□□ -0.63
AGAP3-222	ENST00000490839	ERVK-16	P61578	105 aa		11.12	□□□□□ -0.63
AGAP3-222	ENST00000490839	FAM90A2P	Q658T7	463 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms