RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 OR1L8Q8NGR8 309 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 SPATA3Q8NHX4 192 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 SMR3AQ99954 134 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 NARFLQ9H6Q4 476 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 UNKLQ9H9P5 680 aaKnown RBP8.32□□□□□ -1.08
HDAC3-210ENST00000490808 WFDC1Q9HC57 220 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 MMP26Q9NRE1 261 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 UQCC1Q9NVA1 299 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 TMEM160Q9NX00 188 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 DPM3Q9P2X0 92 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 TCF19Q9Y242 345 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 TIMM9Q9Y5J7 89 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 MINOS1-NBL1R4GNA1 71 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 IGHV1-3A0A0C4DH29 117 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 ANKRD34BA5PLL1 514 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 BTBD17A6NE02 478 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 C22orf46C9J442 243 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 CD5LO43866 347 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 ACTL6BO94805 426 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 TSPAN15O95858 294 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 HBE1P02100 147 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 IL6RP08887 468 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-210ENST00000490808 ATP6V0CP27449 155 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 CD1BP29016 333 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 SNCAP37840 140 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 RPL8P62917 257 aaKnown RBP8.31□□□□□ -1.08
HDAC3-210ENST00000490808 PRCDQ00LT1 54 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 LRRC75BQ2VPJ9 315 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 CYB5R2Q6BCY4 276 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 C1orf229Q6ZS94 237 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-210ENST00000490808 PRIMA1Q86XR5 153 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 TMEM167AQ8TBQ9 72 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 PCNPQ8WW12 178 aaKnown RBP8.31□□□□□ -1.08
HDAC3-210ENST00000490808 CXorf58Q96LI9 332 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 PBDC1Q9BVG4 233 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 LPAR2Q9HBW0 351 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 KCNIP2Q9NS61 270 aa8.31□□□□□ -1.08
HDAC3-210ENST00000490808 POLR3KQ9Y2Y1 108 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-210ENST00000490808 IGHV2-70DA0A0C4DH43 119 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 MFSD2BA6NFX1 497 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 IFNA4P05014 189 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 SAA1P0DJI8 122 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-210ENST00000490808 COX7A1P24310 79 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 REG1BP48304 166 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 COMPP49747 757 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-210ENST00000490808 DLK1P80370 383 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 PJVKQ0ZLH3 352 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 RAB31Q13636 194 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 PXDC1Q5TGL8 231 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 ETV3LQ6ZN32 361 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 TMEM182Q6ZP80 229 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-210ENST00000490808 Q6ZRG5 221 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 THNSL2Q86YJ6 484 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 MMD2Q8IY49 270 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 VKORC1L1Q8N0U8 176 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 LINC01356Q8N9X3 169 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 CLDND2Q8NHS1 167 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 ZDHHC16Q969W1 377 aa8.3□□□□□ -1.08
HDAC3-210ENST00000490808 BSCL2Q96G97 398 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-210ENST00000490808 WDR61Q9GZS3 305 aaKnown RBP8.3□□□□□ -1.08
HDAC3-210ENST00000490808 TBL2Q9Y4P3 447 aaKnown RBP8.3□□□□□ -1.08
HDAC3-210ENST00000490808 ANK3Q12955 4377 aaKnown RBP8.29□□□□□ -1.08
HDAC3-210ENST00000490808 TRAV20A0A0B4J274 112 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 IGHV4-61A0A0C4DH41 118 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 FNDC10F2Z333 226 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 INS-IGF2F8WCM5 200 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 TOX4O94842 621 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 IGKV1-16P04430 117 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 NPY1RP25929 384 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 VDAC2P45880 294 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-210ENST00000490808 DVL1P1P54792 670 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-210ENST00000490808 LMO4P61968 165 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 ZNF616Q08AN1 781 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 UTF1Q5T230 341 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 TPTE2P1Q5T6R2 138 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 VMO1Q7Z5L0 202 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 SLC24A4Q8NFF2 622 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 OR4P4Q8NGL7 312 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 TAF15Q92804 592 aaKnown RBP eCLIP8.29□□□□□ -1.08
HDAC3-210ENST00000490808 HINT2Q9BX68 163 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 HRH4Q9H3N8 390 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 KIAA1456Q9P272 454 aa8.29□□□□□ -1.08
HDAC3-210ENST00000490808 TEX50A0A1B0GTY4 177 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 LY6LH3BQJ8 138 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 J3QLI3 93 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 SNRNP70P08621 437 aaKnown RBP8.28□□□□□ -1.08
HDAC3-210ENST00000490808 H2AFB1P0C5Y9 115 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 ZP3P21754 424 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 FGF7P21781 194 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 BRS3P32247 399 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 UBE2E1P51965 193 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 LCN2P80188 198 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 SCGB2A2Q13296 93 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 PEA15Q15121 130 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 VWC2Q2TAL6 325 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 C2orf83Q53S99 150 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 Q8N7P7 452 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 FAM213BQ8TBF2 198 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 RBMXL1Q96E39 390 aaKnown RBP8.28□□□□□ -1.08
HDAC3-210ENST00000490808 OR4C12Q96R67 309 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms