RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 RBMY1DP0C7P1 496 aaKnown RBP20.9■□□□□ 0.94
HOXB3-211ENST00000490677 LYL1P12980 280 aa20.9■□□□□ 0.94
HOXB3-211ENST00000490677 MFAP2P55001 183 aa20.9■□□□□ 0.94
HOXB3-211ENST00000490677 DGCR14Q96DF8 476 aaKnown RBP20.9■□□□□ 0.94
HOXB3-211ENST00000490677 NDUFA4L2Q9NRX3 87 aa20.9■□□□□ 0.94
HOXB3-211ENST00000490677 LPAR6P43657 344 aa20.89■□□□□ 0.93
HOXB3-211ENST00000490677 VBP1P61758 197 aa20.89■□□□□ 0.93
HOXB3-211ENST00000490677 TMEM61Q8N0U2 210 aa20.89■□□□□ 0.93
HOXB3-211ENST00000490677 DEFB125Q8N687 156 aa20.89■□□□□ 0.93
HOXB3-211ENST00000490677 GDPD1Q8N9F7 314 aa20.89■□□□□ 0.93
HOXB3-211ENST00000490677 CMTM3Q96MX0 182 aa20.89■□□□□ 0.93
HOXB3-211ENST00000490677 HIPK2Q9H2X6 1198 aa20.89■□□□□ 0.93
HOXB3-211ENST00000490677 COMMD3Q9UBI1 195 aa20.89■□□□□ 0.93
HOXB3-211ENST00000490677 CEPT1Q9Y6K0 416 aa20.89■□□□□ 0.93
HOXB3-211ENST00000490677 GPR31O00270 319 aa20.88■□□□□ 0.93
HOXB3-211ENST00000490677 SERPINE2P07093 398 aa20.88■□□□□ 0.93
HOXB3-211ENST00000490677 C8orf88P0DMB2 117 aa20.88■□□□□ 0.93
HOXB3-211ENST00000490677 PTBP1P26599 531 aaKnown RBP eCLIP20.88■□□□□ 0.933e-7■■■■■ 51.9
HOXB3-211ENST00000490677 HLA-DMAP28067 261 aa20.88■□□□□ 0.93
HOXB3-211ENST00000490677 FAM106AQ4KMX7 169 aa20.88■□□□□ 0.93
HOXB3-211ENST00000490677 THOC7Q6I9Y2 204 aaKnown RBP20.88■□□□□ 0.93
HOXB3-211ENST00000490677 OR6F1Q8NGZ6 308 aa20.88■□□□□ 0.93
HOXB3-211ENST00000490677 RETNQ9HD89 108 aa20.88■□□□□ 0.93
HOXB3-211ENST00000490677 SLC2A8Q9NY64 477 aa20.88■□□□□ 0.93
HOXB3-211ENST00000490677 TPPPO94811 219 aa20.87■□□□□ 0.93
HOXB3-211ENST00000490677 TRAPPC2P0DI81 140 aa20.87■□□□□ 0.93
HOXB3-211ENST00000490677 TRAPPC2BP0DI82 140 aa20.87■□□□□ 0.93
HOXB3-211ENST00000490677 GPR183P32249 361 aa20.87■□□□□ 0.93
HOXB3-211ENST00000490677 TM4SF20Q53R12 229 aa20.87■□□□□ 0.93
HOXB3-211ENST00000490677 UXS1Q8NBZ7 420 aa20.87■□□□□ 0.93
HOXB3-211ENST00000490677 OR1L8Q8NGR8 309 aa20.87■□□□□ 0.93
HOXB3-211ENST00000490677 NSG2Q9Y328 171 aa20.87■□□□□ 0.93
HOXB3-211ENST00000490677 ZNF320A2RRD8 509 aa20.86■□□□□ 0.93
HOXB3-211ENST00000490677 DBX1A6NMT0 343 aa20.86■□□□□ 0.93
HOXB3-211ENST00000490677 KRASP01116 189 aa20.86■□□□□ 0.93
HOXB3-211ENST00000490677 OR13C7P0DN81 318 aa20.86■□□□□ 0.93
HOXB3-211ENST00000490677 ELK1P19419 428 aa20.86■□□□□ 0.93
HOXB3-211ENST00000490677 G6PCP35575 357 aa20.86■□□□□ 0.93
HOXB3-211ENST00000490677 GUCA2BQ16661 112 aa20.86■□□□□ 0.93
HOXB3-211ENST00000490677 ISOC1Q96CN7 298 aa20.86■□□□□ 0.93
HOXB3-211ENST00000490677 ZNF436Q9C0F3 470 aaPredicted RBP20.86■□□□□ 0.93
HOXB3-211ENST00000490677 SCPEP1Q9HB40 452 aa20.86■□□□□ 0.93
HOXB3-211ENST00000490677 F8W735 103 aaPredicted RBP20.85■□□□□ 0.93
HOXB3-211ENST00000490677 ERVK-16P61578 105 aa20.85■□□□□ 0.93
HOXB3-211ENST00000490677 CMTM1Q8IZ96 169 aa20.85■□□□□ 0.93
HOXB3-211ENST00000490677 VN1R17PQ8TDU5 208 aa20.85■□□□□ 0.93
HOXB3-211ENST00000490677 OR11H12B2RN74 326 aa20.84■□□□□ 0.93
HOXB3-211ENST00000490677 HPGDSO60760 199 aa20.84■□□□□ 0.93
HOXB3-211ENST00000490677 PHLDA2Q53GA4 152 aa20.84■□□□□ 0.93
HOXB3-211ENST00000490677 ZNF57Q68EA5 555 aaPredicted RBP20.84■□□□□ 0.93
HOXB3-211ENST00000490677 ZFAND6Q6FIF0 208 aa20.84■□□□□ 0.93
HOXB3-211ENST00000490677 HSD17B13Q7Z5P4 300 aaPredicted RBP20.84■□□□□ 0.93
HOXB3-211ENST00000490677 ZNF414Q96IQ9 312 aa20.84■□□□□ 0.93
HOXB3-211ENST00000490677 NAA50Q9GZZ1 169 aaKnown RBP20.84■□□□□ 0.93
HOXB3-211ENST00000490677 SRD5A3Q9H8P0 318 aa20.84■□□□□ 0.93
HOXB3-211ENST00000490677 FAM212BQ9NTI7 297 aaPredicted RBP20.84■□□□□ 0.93
HOXB3-211ENST00000490677 GAR1Q9NY12 217 aaKnown RBP20.84■□□□□ 0.93
HOXB3-211ENST00000490677 F11RQ9Y624 299 aaKnown RBP20.84■□□□□ 0.93
HOXB3-211ENST00000490677 HYDINQ4G0P3 5121 aa20.83■□□□□ 0.93
HOXB3-211ENST00000490677 IGHV3-35A0A0C4DH35 117 aa20.83■□□□□ 0.93
HOXB3-211ENST00000490677 IGKV1-39P01597 117 aa20.83■□□□□ 0.93
HOXB3-211ENST00000490677 IGKV1D-39P04432 117 aa20.83■□□□□ 0.93
HOXB3-211ENST00000490677 SMIM18P0DKX4 95 aa20.83■□□□□ 0.93
HOXB3-211ENST00000490677 SNX29P2Q8IUI4 249 aa20.83■□□□□ 0.93
HOXB3-211ENST00000490677 TMEM14BQ9NUH8 114 aa20.83■□□□□ 0.93
HOXB3-211ENST00000490677 THYN1Q9P016 225 aa20.83■□□□□ 0.93
HOXB3-211ENST00000490677 OR51B2Q9Y5P1 312 aa20.83■□□□□ 0.93
HOXB3-211ENST00000490677 TGOLN2O43493 480 aa20.82■□□□□ 0.92
HOXB3-211ENST00000490677 CTF1Q16619 201 aa20.82■□□□□ 0.92
HOXB3-211ENST00000490677 BTNL8Q6UX41 500 aa20.82■□□□□ 0.92
HOXB3-211ENST00000490677 LSM10Q969L4 123 aaKnown RBP20.82■□□□□ 0.92
HOXB3-211ENST00000490677 PLECQ15149 4684 aaKnown RBP20.82■□□□□ 0.92
HOXB3-211ENST00000490677 K7EIM0 57 aa20.81■□□□□ 0.92
HOXB3-211ENST00000490677 RCVRNP35243 200 aa20.81■□□□□ 0.92
HOXB3-211ENST00000490677 ELLP55199 621 aaPredicted RBP20.81■□□□□ 0.92
HOXB3-211ENST00000490677 UCP3P55916 312 aa20.81■□□□□ 0.92
HOXB3-211ENST00000490677 PLET1Q6UQ28 207 aa20.81■□□□□ 0.92
HOXB3-211ENST00000490677 TMEM190Q8WZ59 177 aa20.81■□□□□ 0.92
HOXB3-211ENST00000490677 SEC22AQ96IW7 307 aa20.81■□□□□ 0.92
HOXB3-211ENST00000490677 FAM110AQ9BQ89 295 aa20.81■□□□□ 0.92
HOXB3-211ENST00000490677 SMIM31A0A1B0GVY4 71 aa20.8■□□□□ 0.92
HOXB3-211ENST00000490677 C15orf61A6NNL5 157 aa20.8■□□□□ 0.92
HOXB3-211ENST00000490677 SLC25A24Q6NUK1 477 aa20.8■□□□□ 0.92
HOXB3-211ENST00000490677 TBC1D26Q86UD7 250 aa20.8■□□□□ 0.92
HOXB3-211ENST00000490677 SCARB1Q8WTV0 552 aa20.8■□□□□ 0.92
HOXB3-211ENST00000490677 MARC2Q969Z3 335 aa20.8■□□□□ 0.92
HOXB3-211ENST00000490677 PALMDQ9NP74 551 aa20.8■□□□□ 0.92
HOXB3-211ENST00000490677 MRPL27Q9P0M9 148 aaKnown RBP20.8■□□□□ 0.92
HOXB3-211ENST00000490677 OR2T8A6NH00 312 aa20.79■□□□□ 0.92
HOXB3-211ENST00000490677 SCAF4O95104 1147 aaKnown RBP20.79■□□□□ 0.92
HOXB3-211ENST00000490677 GABARAPO95166 117 aa20.79■□□□□ 0.92
HOXB3-211ENST00000490677 IFNA6P05013 189 aa20.79■□□□□ 0.92
HOXB3-211ENST00000490677 ADMP35318 185 aa20.79■□□□□ 0.92
HOXB3-211ENST00000490677 TSPAN5P62079 268 aa20.79■□□□□ 0.92
HOXB3-211ENST00000490677 OR5B3Q8NH48 314 aa20.79■□□□□ 0.92
HOXB3-211ENST00000490677 CHRDL1Q9BU40 450 aa20.79■□□□□ 0.92
HOXB3-211ENST00000490677 HINT2Q9BX68 163 aa20.79■□□□□ 0.92
HOXB3-211ENST00000490677 PRNDQ9UKY0 176 aa20.79■□□□□ 0.92
HOXB3-211ENST00000490677 IGHV3-21A0A0B4J1V1 117 aa20.78■□□□□ 0.92
HOXB3-211ENST00000490677 SNAPC5O75971 98 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms