RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 CD300LFQ8TDQ1 290 aa6□□□□□ -1.45
USP39-216ENST00000490193 VN1R17PQ8TDU5 208 aa6□□□□□ -1.45
USP39-216ENST00000490193 BET1LQ9NYM9 111 aa6□□□□□ -1.45
USP39-216ENST00000490193 THYN1Q9P016 225 aa6□□□□□ -1.45
USP39-216ENST00000490193 FBXL17Q9UF56 701 aa6□□□□□ -1.45
USP39-216ENST00000490193 V9GY05 133 aa6□□□□□ -1.45
USP39-216ENST00000490193 IGKV1D-13A0A0B4J2D9 117 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 IGHV3-35A0A0C4DH35 117 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 NDUFA4O00483 81 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 IGKV1-13P0DP09 117 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 RAB6AP20340 208 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 PSMA1P25786 263 aaKnown RBP5.99□□□□□ -1.45
USP39-216ENST00000490193 TALDO1P37837 337 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 MFAP2P55001 183 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 CMC4P56277 68 aaPredicted RBP5.99□□□□□ -1.45
USP39-216ENST00000490193 OR2B8PP59922 312 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 ARL6IP1Q15041 203 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 MSMO1Q15800 293 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 POU2AF1Q16633 256 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 TIMM50Q3ZCQ8 353 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 LIPKQ5VXJ0 399 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 ZNF66Q6ZN08 573 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 MFSD4AQ8N468 514 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 OR11H2Q8NH07 326 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 OR5B3Q8NH48 314 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 TCTEX1D2Q8WW35 142 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 UFD1Q92890 307 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 TMEM203Q969S6 136 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 BSCL2Q96G97 398 aaPredicted RBP5.99□□□□□ -1.45
USP39-216ENST00000490193 AIFM2Q9BRQ8 373 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 HRH4Q9H3N8 390 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 ETV7Q9Y603 341 aa5.99□□□□□ -1.45
USP39-216ENST00000490193 C15orf62A8K5M9 175 aa5.98□□□□□ -1.45
USP39-216ENST00000490193 RBFOX2O43251 390 aaKnown RBP eCLIP5.98□□□□□ -1.45
USP39-216ENST00000490193 CTSDP07339 412 aaPredicted RBP5.98□□□□□ -1.45
USP39-216ENST00000490193 NFYAP23511 347 aaPredicted RBP5.98□□□□□ -1.45
USP39-216ENST00000490193 CRHBPP24387 322 aa5.98□□□□□ -1.45
USP39-216ENST00000490193 THOC7Q6I9Y2 204 aaKnown RBP5.98□□□□□ -1.45
USP39-216ENST00000490193 SSX9Q7RTT3 188 aa5.98□□□□□ -1.45
USP39-216ENST00000490193 APRG1Q8IVJ8 170 aa5.98□□□□□ -1.45
USP39-216ENST00000490193 GDPD1Q8N9F7 314 aa5.98□□□□□ -1.45
USP39-216ENST00000490193 DCSTAMPQ9H295 470 aa5.98□□□□□ -1.45
USP39-216ENST00000490193 SPATA2Q9UM82 520 aa5.98□□□□□ -1.45
USP39-216ENST00000490193 A0A075B6Q4 140 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 METTL21EPA6NDL7 271 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 OR2T8A6NH00 312 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 IGLL5B9A064 214 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 J3QRK9 145 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 CYB5BO43169 146 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 RPA2P15927 270 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 TAS2R31P59538 309 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 RPS25P62851 125 aaKnown RBP5.97□□□□□ -1.45
USP39-216ENST00000490193 FABP5Q01469 135 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 ZNF124Q15973 351 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 HES5Q5TA89 166 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 CNIH2Q6PI25 160 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 HSD17B13Q7Z5P4 300 aaPredicted RBP5.97□□□□□ -1.45
USP39-216ENST00000490193 Q8NAQ8 132 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 GIMAP1Q8WWP7 306 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 ZNF414Q96IQ9 312 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 CHRDL1Q9BU40 450 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 QTRT1Q9BXR0 403 aaKnown RBP5.97□□□□□ -1.45
USP39-216ENST00000490193 TAS2R8Q9NYW2 309 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 SMPXQ9UHP9 88 aa5.97□□□□□ -1.45
USP39-216ENST00000490193 ELF5Q9UKW6 265 aaPredicted RBP5.97□□□□□ -1.45
USP39-216ENST00000490193 TRAV1-2A0A0B4J238 106 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 IFITM5A6NNB3 132 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 UPK2O00526 184 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 CHEK1O14757 476 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 MRPS14O60783 128 aaKnown RBP5.96□□□□□ -1.46
USP39-216ENST00000490193 SERPINE2P07093 398 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 NQO2P16083 231 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 MLLT11Q13015 90 aaPredicted RBP5.96□□□□□ -1.46
USP39-216ENST00000490193 TMEM187Q14656 261 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 HACD4Q5VWC8 232 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 FAM90A2PQ658T7 463 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 NR2C2APQ86WQ0 139 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 OR10C1Q96KK4 312 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 RNF2Q99496 336 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 COMMD5Q9GZQ3 224 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 HRASLSQ9HDD0 168 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 ACOT13Q9NPJ3 140 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 C21orf62Q9NYP8 219 aa5.96□□□□□ -1.46
USP39-216ENST00000490193 IGHV4-4A0A075B6R2 117 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 TRAV10A0A0B4J240 114 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 TRAV3A0A0B4J244 114 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 IGHV7-4-1A0A0J9YVY3 117 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 PRSS29PA6NIE9 313 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 C15orf61A6NNL5 157 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 PTGES3LE9PB15 166 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 K7EIM0 57 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 PDCD5O14737 125 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 RTL8CO15255 209 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 DEFB4AO15263 64 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 XRCC3O43542 346 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 HPRT1P00492 218 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 CA1P00915 261 aaPredicted RBP5.95□□□□□ -1.46
USP39-216ENST00000490193 CD5P06127 495 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms