RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 PDPNQ86YL7 162 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 PCGF1Q9BSM1 259 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 PLEKHA3Q9HB20 300 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 NPVFQ9HCQ7 196 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 MANBALQ9NQG1 85 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 RALYQ9UKM9 306 aaKnown RBP13.1□□□□□ -0.31
SNX5-214ENST00000490175 SMCO3A2RU48 225 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 IGHV1-8P0DP01 117 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 NDUFA6P56556 154 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 TMEM249Q2WGJ8 235 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 FAM90A2PQ658T7 463 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 RAB1CQ92928 201 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 RAB24Q969Q5 203 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 ST6GALNAC6Q969X2 333 aa13.1□□□□□ -0.31
SNX5-214ENST00000490175 NEIL1Q96FI4 390 aaPredicted RBP13.1□□□□□ -0.31
SNX5-214ENST00000490175 SPTA1P02549 2419 aa13.09□□□□□ -0.31
SNX5-214ENST00000490175 TGOLN2O43493 480 aa13.09□□□□□ -0.31
SNX5-214ENST00000490175 IGHV2-70P01814 119 aa13.09□□□□□ -0.31
SNX5-214ENST00000490175 SAA1P0DJI8 122 aaPredicted RBP13.09□□□□□ -0.31
SNX5-214ENST00000490175 IL3RAP26951 378 aa13.09□□□□□ -0.31
SNX5-214ENST00000490175 PSMB3P49720 205 aa13.09□□□□□ -0.31
SNX5-214ENST00000490175 OR4C13Q8NGP0 309 aa13.09□□□□□ -0.31
SNX5-214ENST00000490175 OR4A5Q8NH83 315 aa13.09□□□□□ -0.31
SNX5-214ENST00000490175 TNFRSF14Q92956 283 aa13.09□□□□□ -0.31
SNX5-214ENST00000490175 FLYWCH2Q96CP2 140 aaKnown RBP13.09□□□□□ -0.31
SNX5-214ENST00000490175 HARBI1Q96MB7 349 aa13.09□□□□□ -0.31
SNX5-214ENST00000490175 NABP2Q9BQ15 211 aa13.09□□□□□ -0.31
SNX5-214ENST00000490175 LSM4Q9Y4Z0 139 aaKnown RBP13.09□□□□□ -0.31
SNX5-214ENST00000490175 TRAV20A0A0B4J274 112 aa13.08□□□□□ -0.31
SNX5-214ENST00000490175 YIF1AO95070 293 aa13.08□□□□□ -0.31
SNX5-214ENST00000490175 CA2P00918 260 aa13.08□□□□□ -0.31
SNX5-214ENST00000490175 CXCL1P09341 107 aa13.08□□□□□ -0.31
SNX5-214ENST00000490175 COL8A2P25067 703 aa13.08□□□□□ -0.31
SNX5-214ENST00000490175 CDC34P49427 236 aaPredicted RBP13.08□□□□□ -0.31
SNX5-214ENST00000490175 MEF2BQ02080 365 aaPredicted RBP13.08□□□□□ -0.31
SNX5-214ENST00000490175 CDSNQ15517 529 aa13.08□□□□□ -0.31
SNX5-214ENST00000490175 ZNF343Q6P1L6 599 aa13.08□□□□□ -0.31
SNX5-214ENST00000490175 VSTM2AQ8TAG5 236 aa13.08□□□□□ -0.31
SNX5-214ENST00000490175 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.31
SNX5-214ENST00000490175 GAR1Q9NY12 217 aaKnown RBP13.08□□□□□ -0.31
SNX5-214ENST00000490175 DOK5Q9P104 306 aa13.08□□□□□ -0.31
SNX5-214ENST00000490175 TEX50A0A1B0GTY4 177 aa13.08□□□□□ -0.32
SNX5-214ENST00000490175 C11orf42Q8N5U0 333 aa13.08□□□□□ -0.32
SNX5-214ENST00000490175 MGST2Q99735 147 aa13.08□□□□□ -0.32
SNX5-214ENST00000490175 TMEM133Q9H2Q1 129 aa13.08□□□□□ -0.32
SNX5-214ENST00000490175 DMRT1Q9Y5R6 373 aa13.08□□□□□ -0.32
SNX5-214ENST00000490175 URGCP-MRPS24S4R325 110 aa13.08□□□□□ -0.32
SNX5-214ENST00000490175 RBP4P02753 201 aa13.07□□□□□ -0.32
SNX5-214ENST00000490175 C1QTNF9P0C862 333 aa13.07□□□□□ -0.32
SNX5-214ENST00000490175 USF1P22415 310 aaPredicted RBP13.07□□□□□ -0.32
SNX5-214ENST00000490175 MC5RP33032 325 aa13.07□□□□□ -0.32
SNX5-214ENST00000490175 RAB31Q13636 194 aa13.07□□□□□ -0.32
SNX5-214ENST00000490175 GGTLC1Q9BX51 225 aa13.07□□□□□ -0.32
SNX5-214ENST00000490175 HINT2Q9BX68 163 aa13.07□□□□□ -0.32
SNX5-214ENST00000490175 RAB1BQ9H0U4 201 aa13.07□□□□□ -0.32
SNX5-214ENST00000490175 PRORYQ9H606 182 aa13.07□□□□□ -0.32
SNX5-214ENST00000490175 WASHC3Q9Y3C0 194 aa13.07□□□□□ -0.32
SNX5-214ENST00000490175 ADGRG4Q8IZF6 3080 aa13.07□□□□□ -0.32
SNX5-214ENST00000490175 ELOA3CA0A087WX78 387 aaPredicted RBP13.06□□□□□ -0.32
SNX5-214ENST00000490175 TGIF2-C20orf24A0A0A6YYL0 155 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 INS-IGF2F8WCM5 200 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 TMEM250H0YL14 139 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 ARSJQ5FYB0 599 aaPredicted RBP13.06□□□□□ -0.32
SNX5-214ENST00000490175 FAM209BQ5JX69 171 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 TEPPQ6URK8 271 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 ZNF841Q6ZN19 808 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 TGIF2LXQ8IUE1 241 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 ANKHD1Q8IWZ3 2542 aaKnown RBP13.06□□□□□ -0.32
SNX5-214ENST00000490175 MYOD1P15172 320 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 CD81P60033 236 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 RPL8P62917 257 aaKnown RBP13.06□□□□□ -0.32
SNX5-214ENST00000490175 BSXQ3C1V8 233 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 C2orf83Q53S99 150 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 OR1L8Q8NGR8 309 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 TMEM167AQ8TBQ9 72 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 COMMD5Q9GZQ3 224 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 CBLN4Q9NTU7 201 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 PXMP4Q9Y6I8 212 aa13.06□□□□□ -0.32
SNX5-214ENST00000490175 A0A1W2PPV4 95 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 LYNX1G3V0Z9 82 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 CLDN34H7C241 214 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HMGB3O15347 200 aaKnown RBP13.05□□□□□ -0.32
SNX5-214ENST00000490175 LYNX1P0DP58 116 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 REG1BP48304 166 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 SPTBN4Q9H254 2564 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HIST1H2BKO60814 126 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HIST1H2BJP06899 126 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HIST1H2BOP23527 126 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HIST1H2BBP33778 126 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 RND2P52198 227 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 PRRX1P54821 245 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HIST1H2BDP58876 126 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HIST1H2BCP62807 126 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HIST2H2BEQ16778 126 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.05□□□□□ -0.32
SNX5-214ENST00000490175 C8orf46Q8TAG6 207 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HIST1H2BHQ93079 126 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 FAM210BQ96KR6 192 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HIST1H2BNQ99877 126 aa13.05□□□□□ -0.32
SNX5-214ENST00000490175 HIST1H2BMQ99879 126 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms