RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 SFXN4Q6P4A7 337 aa11.74□□□□□ -0.53
PLOD3-216ENST00000489927 KIR2DL5AQ8N109 375 aa11.74□□□□□ -0.53
PLOD3-216ENST00000489927 GDPD1Q8N9F7 314 aa11.74□□□□□ -0.53
PLOD3-216ENST00000489927 KIR2DL5BQ8NHK3 375 aa11.74□□□□□ -0.53
PLOD3-216ENST00000489927 SLC5A7Q9GZV3 580 aa11.74□□□□□ -0.53
PLOD3-216ENST00000489927 RRP15Q9Y3B9 282 aaKnown RBP11.74□□□□□ -0.53
PLOD3-216ENST00000489927 FCER2P06734 321 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 SERPINE2P07093 398 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 OR13C7P0DN81 318 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 FXYD4P59646 89 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 IZUMO2Q6UXV1 221 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 ZNF818PQ6ZRF7 136 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 TPRA1Q86W33 373 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 HOGA1Q86XE5 327 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 DMBX1Q8NFW5 382 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 OR51H1Q8NH63 302 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 BSCL2Q96G97 398 aaPredicted RBP11.73□□□□□ -0.53
PLOD3-216ENST00000489927 CHRDL1Q9BU40 450 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 PLEKHA2Q9HB19 425 aa11.73□□□□□ -0.53
PLOD3-216ENST00000489927 TRAV18A0A075B6X5 111 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 IGHV3OR16-8A0A075B7F1 116 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 IGHV3-21A0A0B4J1V1 117 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 TEX50A0A1B0GTY4 177 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 OR4C46A6NHA9 309 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 CYB5BO43169 146 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 DEDDO75618 318 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 FGF2P09038 288 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 MFAP2P55001 183 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 UBE2UQ5VVX9 321 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 SLC25A24Q6NUK1 477 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 TMEM217Q8N7C4 229 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 OR5H6Q8NGV6 325 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 OR5B3Q8NH48 314 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 SLC25A38Q96DW6 304 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 C20orf24Q9BUV8 137 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 MAP6D1Q9H9H5 199 aa11.72□□□□□ -0.53
PLOD3-216ENST00000489927 F8W735 103 aaPredicted RBP11.71□□□□□ -0.53
PLOD3-216ENST00000489927 NDUFA4O00483 81 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 ZNF207O43670 478 aaKnown RBP11.71□□□□□ -0.53
PLOD3-216ENST00000489927 TRAPPC2P0DI81 140 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 TRAPPC2BP0DI82 140 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 PSMB9P28065 219 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 FCGR2BP31994 310 aaPredicted RBP11.71□□□□□ -0.53
PLOD3-216ENST00000489927 ADMP35318 185 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 AADACL3Q5VUY0 350 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 THOC7Q6I9Y2 204 aaKnown RBP11.71□□□□□ -0.53
PLOD3-216ENST00000489927 SPSB3Q6PJ21 355 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 TMEM17Q86X19 198 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 CD300LFQ8TDQ1 290 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 SCARB1Q8WTV0 552 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 PHLDA1Q8WV24 401 aaPredicted RBP11.71□□□□□ -0.53
PLOD3-216ENST00000489927 GALNT14Q96FL9 552 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 C21orf62Q9NYP8 219 aa11.71□□□□□ -0.53
PLOD3-216ENST00000489927 HECTD4Q9Y4D8 3996 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 K7EMT4 169 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 CTSDP07339 412 aaPredicted RBP11.7□□□□□ -0.54
PLOD3-216ENST00000489927 SDC2P34741 201 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 HSPA13P48723 471 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 GABARAPL2P60520 117 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 MXD1Q05195 221 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 HSD17B13Q7Z5P4 300 aaPredicted RBP11.7□□□□□ -0.54
PLOD3-216ENST00000489927 APRG1Q8IVJ8 170 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 SPARTQ8N0X7 666 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 UBAC2Q8NBM4 344 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 GIMAP1Q8WWP7 306 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 VCX3BQ9H321 246 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 NDUFA4L2Q9NRX3 87 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 COMMD9Q9P000 198 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 ETV7Q9Y603 341 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 F11RQ9Y624 299 aaKnown RBP11.7□□□□□ -0.54
PLOD3-216ENST00000489927 VPS13DQ5THJ4 4388 aa11.7□□□□□ -0.54
PLOD3-216ENST00000489927 MARCH11A6NNE9 402 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 K7EIM0 57 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 CLEC2LP0C7M8 214 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 GNRHRP30968 328 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 ZNF124Q15973 351 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 LGALS9CQ6DKI2 356 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 OR5AP2Q8NGF4 316 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 OR1L8Q8NGR8 309 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 LSM10Q969L4 123 aaKnown RBP11.69□□□□□ -0.54
PLOD3-216ENST00000489927 ATP6V0BQ99437 205 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 RNF2Q99496 336 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 HINT2Q9BX68 163 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 AUNIPQ9H7T9 357 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 SSR3Q9UNL2 185 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 PCLOQ9Y6V0 5065 aa11.69□□□□□ -0.54
PLOD3-216ENST00000489927 C15orf62A8K5M9 175 aa11.68□□□□□ -0.54
PLOD3-216ENST00000489927 MRPS14O60783 128 aaKnown RBP11.68□□□□□ -0.54
PLOD3-216ENST00000489927 SCAND1P57086 179 aa11.68□□□□□ -0.54
PLOD3-216ENST00000489927 ERVK-16P61578 105 aa11.68□□□□□ -0.54
PLOD3-216ENST00000489927 Q56UQ5 140 aa11.68□□□□□ -0.54
PLOD3-216ENST00000489927 IDNKQ5T6J7 187 aa11.68□□□□□ -0.54
PLOD3-216ENST00000489927 ZNF414Q96IQ9 312 aa11.68□□□□□ -0.54
PLOD3-216ENST00000489927 SMPXQ9UHP9 88 aa11.68□□□□□ -0.54
PLOD3-216ENST00000489927 NSG2Q9Y328 171 aa11.68□□□□□ -0.54
PLOD3-216ENST00000489927 A0A0A6YYH2 397 aa11.67□□□□□ -0.54
PLOD3-216ENST00000489927 MEIS3P1A6NDR6 274 aa11.67□□□□□ -0.54
PLOD3-216ENST00000489927 A6NJ64 397 aa11.67□□□□□ -0.54
PLOD3-216ENST00000489927 KRASP01116 189 aa11.67□□□□□ -0.54
PLOD3-216ENST00000489927 RLN1P04808 185 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms