RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SNTNA6NMZ2 147 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 HBE1P02100 147 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 CTSGP08311 255 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 GTF2A1P52655 376 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-233ENST00000489352 TMEM69Q5SWH9 247 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 ADGRG5Q8IZF4 528 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 LINC00528Q8N1L1 170 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 OR4A4PQ8NGN8 299 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 SCARB1Q8WTV0 552 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 CANT1Q8WVQ1 401 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 C5orf30Q96GV9 206 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 UQCC2Q9BRT2 126 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 GINS4Q9BRT9 223 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 TMEM59Q9BXS4 323 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 HRASLSQ9HDD0 168 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 C12orf4Q9NQ89 552 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 K7EQG2 157 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 HRASP01112 189 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 CD3GP09693 182 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 HTR2CP28335 458 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 MS4A2Q01362 244 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 RCN1Q15293 331 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 PSMG4Q5JS54 123 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 RPL22L1Q6P5R6 122 aaKnown RBP7.98□□□□□ -1.13
HDAC6-233ENST00000489352 PUSL1Q8N0Z8 303 aaKnown RBP7.98□□□□□ -1.13
HDAC6-233ENST00000489352 GDPD1Q8N9F7 314 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 OR4S2Q8NH73 311 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 Q96MT0 163 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 C7orf50Q9BRJ6 194 aaKnown RBP7.98□□□□□ -1.13
HDAC6-233ENST00000489352 COMMD5Q9GZQ3 224 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 VSIRQ9H7M9 311 aa7.98□□□□□ -1.13
HDAC6-233ENST00000489352 TRAV8-7A0A075B6U6 113 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 A0A1W2PS18 150 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 APOHP02749 345 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-233ENST00000489352 UBBP0CG47 229 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 DNAH10OSP0CZ25 163 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 OR13C7P0DN81 318 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 DEFB130BP0DP73 79 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 DEFB130AP0DP74 79 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 MRPS15P82914 257 aaKnown RBP7.97□□□□□ -1.13
HDAC6-233ENST00000489352 KIR3DS1Q14943 382 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 SSX1Q16384 188 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 Q6ZRN7 208 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-233ENST00000489352 ARHGAP24Q8N264 748 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 UHRF2Q96PU4 802 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 CMSS1Q9BQ75 279 aaKnown RBP7.97□□□□□ -1.13
HDAC6-233ENST00000489352 AIFM2Q9BRQ8 373 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 TAGLN3Q9UI15 199 aa7.97□□□□□ -1.13
HDAC6-233ENST00000489352 A0A087WTM6 91 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 IGLV5-52A0A0A0MRZ9 124 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 A0A1W2PPK0 400 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 IGLC7A0M8Q6 106 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 HELTA6NFD8 242 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 FABP7O15540 132 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 SERPINE2P07093 398 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 CELP19835 753 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 EIF2B2P49770 351 aaKnown RBP7.96□□□□□ -1.14
HDAC6-233ENST00000489352 TAS2R43P59537 309 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 RRN3P1Q2M238 152 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 CCDC58Q4VC31 144 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 IGSF11Q5DX21 431 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 OGFRL1Q5TC84 451 aaPredicted RBP7.96□□□□□ -1.14
HDAC6-233ENST00000489352 OR10K2Q6IF99 312 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 NFE4Q86UQ8 179 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 RNF141Q8WVD5 230 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 ERVK13-1Q9NX77 482 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 GOLT1BQ9Y3E0 138 aa7.96□□□□□ -1.14
HDAC6-233ENST00000489352 CGB1A6NKQ9 187 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 G3V2T6 193 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 J3QRK9 145 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 ATP5G1P05496 136 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 CD36P16671 472 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 ATP5G3P48201 142 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 HOXA1P49639 335 aaPredicted RBP7.95□□□□□ -1.14
HDAC6-233ENST00000489352 MFAP4P55083 255 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 FXYD7P58549 80 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 SNRPD3P62318 126 aaKnown RBP7.95□□□□□ -1.14
HDAC6-233ENST00000489352 DHRS2Q13268 280 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 Q499Y3 187 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 MEDAGQ5VYS4 303 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 NKAIN3Q8N8D7 197 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 OR10W1Q8NGF6 305 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 TCTEX1D2Q8WW35 142 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 TRUB1Q8WWH5 349 aaKnown RBP7.95□□□□□ -1.14
HDAC6-233ENST00000489352 CCDC124Q96CT7 223 aaKnown RBP7.95□□□□□ -1.14
HDAC6-233ENST00000489352 LGALS12Q96DT0 336 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 NARS2Q96I59 477 aaKnown RBP7.95□□□□□ -1.14
HDAC6-233ENST00000489352 UPK3BQ9BT76 320 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 TM2D1Q9BX74 207 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 QTRT1Q9BXR0 403 aaKnown RBP7.95□□□□□ -1.14
HDAC6-233ENST00000489352 NXF2Q9GZY0 626 aaKnown RBP7.95□□□□□ -1.14
HDAC6-233ENST00000489352 FAT3Q8TDW7 4589 aa7.95□□□□□ -1.14
HDAC6-233ENST00000489352 TRBV6-7A0A0A0MS04 114 aa7.94□□□□□ -1.14
HDAC6-233ENST00000489352 GNG7O60262 68 aa7.94□□□□□ -1.14
HDAC6-233ENST00000489352 NPPCP23582 126 aa7.94□□□□□ -1.14
HDAC6-233ENST00000489352 KDM4DQ6B0I6 523 aa7.94□□□□□ -1.14
HDAC6-233ENST00000489352 HSD17B13Q7Z5P4 300 aaPredicted RBP7.94□□□□□ -1.14
HDAC6-233ENST00000489352 RNF125Q96EQ8 232 aa7.94□□□□□ -1.14
HDAC6-233ENST00000489352 AQP12BA6NM10 295 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 LYRM9A8MSI8 78 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms