RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 IFNL4K9M1U5 179 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 SP9P0CG40 484 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 WDR82Q6UXN9 313 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 ANKRD36A6QL64 1941 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 PRDM6Q9NQX0 595 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 IGKV1D-13A0A0B4J2D9 117 aa14.84□□□□□ -0.03
NPHP4-209ENST00000489180 IGKV1-13P0DP09 117 aa14.84□□□□□ -0.03
NPHP4-209ENST00000489180 GPX4P36969 197 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-209ENST00000489180 EMP1P54849 157 aa14.84□□□□□ -0.03
NPHP4-209ENST00000489180 PRB3Q04118 309 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-209ENST00000489180 TEX45Q8NA69 505 aa14.84□□□□□ -0.03
NPHP4-209ENST00000489180 PLPPR1Q8TBJ4 325 aa14.84□□□□□ -0.03
NPHP4-209ENST00000489180 C18orf12Q96KH6 178 aa14.84□□□□□ -0.03
NPHP4-209ENST00000489180 M0R381 172 aa14.84□□□□□ -0.03
NPHP4-209ENST00000489180 C1QTNF5Q9BXJ0 243 aa14.84□□□□□ -0.03
NPHP4-209ENST00000489180 SBF2Q86WG5 1849 aa14.84□□□□□ -0.03
NPHP4-209ENST00000489180 LINC00587B1AMM8 73 aa14.84□□□□□ -0.03
NPHP4-209ENST00000489180 CACNA1IQ9P0X4 2223 aa14.83□□□□□ -0.03
NPHP4-209ENST00000489180 CABIN1Q9Y6J0 2220 aa14.83□□□□□ -0.03
NPHP4-209ENST00000489180 HAX1O00165 279 aa14.83□□□□□ -0.03
NPHP4-209ENST00000489180 JOSD1Q15040 202 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-209ENST00000489180 SLC25A28Q96A46 364 aa14.83□□□□□ -0.04
NPHP4-209ENST00000489180 LYZL4Q96KX0 146 aa14.83□□□□□ -0.04
NPHP4-209ENST00000489180 PMCHL2Q9BQD1 86 aa14.83□□□□□ -0.04
NPHP4-209ENST00000489180 PIMREGQ9BSJ6 248 aa14.83□□□□□ -0.04
NPHP4-209ENST00000489180 RAX2Q96IS3 184 aa14.83□□□□□ -0.04
NPHP4-209ENST00000489180 KIR2DL4Q99706 377 aa14.83□□□□□ -0.04
NPHP4-209ENST00000489180 MRPL20Q9BYC9 149 aaKnown RBP14.83□□□□□ -0.04
NPHP4-209ENST00000489180 RPL23P62829 140 aaKnown RBP14.83□□□□□ -0.04
NPHP4-209ENST00000489180 ZNF236Q9UL36 1845 aa14.83□□□□□ -0.04
NPHP4-209ENST00000489180 C1QTNF9BB2RNN3 333 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 PPP1R17O96001 155 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 HOXA5P20719 270 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 PSG7Q13046 419 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 TMEM170BQ5T4T1 132 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 RNASE7Q9H1E1 156 aaKnown RBP14.82□□□□□ -0.04
NPHP4-209ENST00000489180 CD55P08174 381 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 FAM159AQ6UWV7 190 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 ZNF418Q8TF45 676 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-209ENST00000489180 PRR19A6NJB7 356 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 LOXL4Q96JB6 756 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 TMEM106BQ9NUM4 274 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 FAM181BA6NEQ2 426 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 H0YIZ8 118 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 UCNP55089 124 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 SAPCD1Q5SSQ6 148 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 OR52E5Q8NH55 327 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 GFI1Q99684 422 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 NRXN2Q9P2S2 1712 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 PSMB11A5LHX3 300 aa14.82□□□□□ -0.04
NPHP4-209ENST00000489180 REPIN1Q9BWE0 567 aaKnown RBP14.82□□□□□ -0.04
NPHP4-209ENST00000489180 ARID2Q68CP9 1835 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 A0A087WWC5 75 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 IGKV1D-33P01593 117 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 IGKV1-33P01594 117 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 GNG5P63218 68 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 PEF1Q9UBV8 284 aaKnown RBP14.81□□□□□ -0.04
NPHP4-209ENST00000489180 C1QTNF9P0C862 333 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 FADS6Q8N9I5 356 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 GEMIN7Q9H840 131 aaKnown RBP14.81□□□□□ -0.04
NPHP4-209ENST00000489180 IGKV1-9A0A0C4DH69 117 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 OR11H12B2RN74 326 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 TMPRSS3P57727 454 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 TMEM30BQ3MIR4 351 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 TTC32Q5I0X7 151 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 OR11H1Q8NG94 326 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 OR11H2Q8NH07 326 aa14.81□□□□□ -0.04
NPHP4-209ENST00000489180 RPP21Q9H633 154 aaKnown RBP14.81□□□□□ -0.04
NPHP4-209ENST00000489180 OSR1Q8TAX0 266 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-209ENST00000489180 J3QW42 95 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 SERF1AO75920 110 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 LYPD3O95274 346 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 IGHV1-2P23083 117 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 ADMP35318 185 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 GLRXP35754 106 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 FOXC2Q99958 501 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 SSBP4Q9BWG4 385 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-209ENST00000489180 TRGV3P03979 118 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 CIRBPQ14011 172 aaKnown RBP14.8□□□□□ -0.04
NPHP4-209ENST00000489180 MOB4Q9Y3A3 225 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 IGHV2OR16-5A0A0B4J2B6 119 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 KBTBD11-OT1A0A1B0GTJ5 212 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 RAMP3O60896 148 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 COX6B1P14854 86 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 WFDC1Q9HC57 220 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 MRPL16Q9NX20 251 aaKnown RBP14.8□□□□□ -0.04
NPHP4-209ENST00000489180 A0A0A6YYD4 124 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 TGFAP01135 160 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 CHRNA10Q9GZZ6 450 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 SCN4AP35499 1836 aa14.8□□□□□ -0.04
NPHP4-209ENST00000489180 ATP5J2P56134 94 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 VWCEQ96DN2 955 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 SCN8AQ9UQD0 1980 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 B9A039 149 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 PRB4P10163 310 aaPredicted RBP14.79□□□□□ -0.04
NPHP4-209ENST00000489180 CCL20P78556 96 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 LRTM2Q8N967 370 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 FBXL7Q9UJT9 491 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 MDC1Q14676 2089 aaKnown RBP14.79□□□□□ -0.04
NPHP4-209ENST00000489180 J3QRE1 110 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms