RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 CATR1Q13166 79 aa8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 UBE2NLQ5JXB2 153 aa8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 ZNF57Q68EA5 555 aaPredicted RBP8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 DHRS11Q6UWP2 260 aa8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 LYSMD2Q8IV50 215 aa8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 SAMD12Q8N8I0 201 aa8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 DMBX1Q8NFW5 382 aa8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 MOB3AQ96BX8 217 aa8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 ZNF2Q9BSG1 426 aaPredicted RBP8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 QTRT1Q9BXR0 403 aaKnown RBP8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 IFT46Q9NQC8 304 aa8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 TECRQ9NZ01 308 aaKnown RBP8.39□□□□□ -1.07
PCYT1A-215ENST00000488235 TRBV7-1A0A0A6YYK4 115 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 MARCH11A6NNE9 402 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 DHFRP00374 187 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 EIF4EP06730 217 aaKnown RBP8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 C8orf88P0DMB2 117 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 OR13C7P0DN81 318 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 HIST1H1BP16401 226 aaKnown RBP8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 NAT1P18440 290 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 G6PCP35575 357 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 CBX5P45973 191 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 HERV-K104P61576 105 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 FAM106AQ4KMX7 169 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 TMEM69Q5SWH9 247 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 GDPD1Q8N9F7 314 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 S100A16Q96FQ6 103 aaKnown RBP8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 CXorf58Q96LI9 332 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 COMMD5Q9GZQ3 224 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 NDUFA4L2Q9NRX3 87 aa8.38□□□□□ -1.07
PCYT1A-215ENST00000488235 IGHV3OR16-8A0A075B7F1 116 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 OR2T8A6NH00 312 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 TGOLN2O43493 480 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 KRASP01116 189 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 SERPINE2P07093 398 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 F2RP25116 425 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 PTBP1P26599 531 aaKnown RBP eCLIP8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 HLA-DMAP28067 261 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 ADMP35318 185 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 HRH1P35367 487 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 LPAR6P43657 344 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 NCS1P62166 190 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 PHLDA2Q53GA4 152 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 OR52B4Q8NGK2 314 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 DGCR14Q96DF8 476 aaKnown RBP8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 AIFM2Q9BRQ8 373 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 CHRDL1Q9BU40 450 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 ZNF436Q9C0F3 470 aaPredicted RBP8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 COMMD9Q9P000 198 aa8.37□□□□□ -1.07
PCYT1A-215ENST00000488235 K7EIM0 57 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 IGKV1-39P01597 117 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 IGKV1D-39P04432 117 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 TRAPPC2P0DI81 140 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 TRAPPC2BP0DI82 140 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 EWSR1Q01844 656 aaKnown RBP eCLIP8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 SLC25A24Q6NUK1 477 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 PLET1Q6UQ28 207 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 OR5H2Q8NGV7 314 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 CD300LFQ8TDQ1 290 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 GPX8Q8TED1 209 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 SCARB1Q8WTV0 552 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 TMEM190Q8WZ59 177 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 SLC25A46Q96AG3 418 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 SRSF8Q9BRL6 282 aaKnown RBP8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 OVOL2Q9BRP0 275 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 HINT2Q9BX68 163 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 OR51B2Q9Y5P1 312 aa8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 F11RQ9Y624 299 aaKnown RBP8.36□□□□□ -1.07
PCYT1A-215ENST00000488235 ZNF207O43670 478 aaKnown RBP8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 TMEM127O75204 238 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 FGF2P09038 288 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 PRSS3P35030 304 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 VBP1P61758 197 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 SLC16A13Q7RTY0 426 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 CROCCP3Q8IVE0 287 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 TSPAN14Q8NG11 270 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 OR1L8Q8NGR8 309 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 VN1R17PQ8TDU5 208 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 GGTLC1Q9BX51 225 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 TMEM14BQ9NUH8 114 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 COMMD3Q9UBI1 195 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 UBQLN2Q9UHD9 624 aa8.35□□□□□ -1.07
PCYT1A-215ENST00000488235 GPR31O00270 319 aa8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 IGHV3-48P01763 117 aa8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 TAS2R46P59540 309 aa8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 ERVK-16P61578 105 aa8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 IZUMO4Q1ZYL8 232 aa8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 ODF3L2Q3SX64 289 aa8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 SNX29P2Q8IUI4 249 aa8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 OR6F1Q8NGZ6 308 aa8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 LSM10Q969L4 123 aaKnown RBP8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 FUNDC2Q9BWH2 189 aa8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 C21orf62Q9NYP8 219 aa8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 MRPL27Q9P0M9 148 aaKnown RBP8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 UFC1Q9Y3C8 167 aa8.34□□□□□ -1.07
PCYT1A-215ENST00000488235 A0A087WXM4 84 aa8.33□□□□□ -1.08
PCYT1A-215ENST00000488235 LOC102724200A0A096LPH7 203 aaPredicted RBP8.33□□□□□ -1.08
PCYT1A-215ENST00000488235 TRAV25A0A0B4J276 109 aa8.33□□□□□ -1.08
PCYT1A-215ENST00000488235 C15orf61A6NNL5 157 aa8.33□□□□□ -1.08
PCYT1A-215ENST00000488235 M0QYG6 137 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms