RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 TMEM177Q53S58 311 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 WDR25Q64LD2 544 aaPredicted RBP2.18□□□□□ -2.06
C9orf72-205ENST00000488117 TMEM200BQ69YZ2 307 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 WDR73Q6P4I2 378 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 TMEM144Q7Z5S9 345 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 OR1L6Q8NGR2 347 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 SNRNP40Q96DI7 357 aaKnown RBP2.18□□□□□ -2.06
C9orf72-205ENST00000488117 MISP3Q96FF7 219 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 WFIKKN1Q96NZ8 548 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 MGST2Q99735 147 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 SCNM1Q9BWG6 230 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 GGTLC1Q9BX51 225 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 CLEC7AQ9BXN2 247 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 SRD5A3Q9H8P0 318 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 SERTAD4Q9NUC0 356 aa2.18□□□□□ -2.06
C9orf72-205ENST00000488117 XKRY2A2RUG3 117 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 HELTA6NFD8 242 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 PMS2P5A8MQ11 134 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 C1QTNF9BB2RNN3 333 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 TRGC2P03986 189 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 STAG3L2P0CL84 134 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 STAG3L3P0CL85 134 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 SELLP14151 372 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 HNF1AP20823 631 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 REG1BP48304 166 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 RND2P52198 227 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 ERVFC1-1P60608 527 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 UBE2L3P68036 154 aaKnown RBP2.17□□□□□ -2.06
C9orf72-205ENST00000488117 LCN2P80188 198 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 EFNB3Q15768 340 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 AARDQ4LEZ3 155 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 C4orf17Q53FE4 359 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 ZNF343Q6P1L6 599 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 ZNF295-AS1Q8N0V1 137 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 LINC00311Q8N616 119 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 ZNF439Q8NDP4 499 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 DDB2Q92466 427 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 TMEM18Q96B42 140 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 NABP2Q9BQ15 211 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 RNF24Q9Y225 148 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 ZNF835Q9Y2P0 537 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 INSIG2Q9Y5U4 225 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 KLF2Q9Y5W3 355 aaPredicted RBP2.17□□□□□ -2.06
C9orf72-205ENST00000488117 TRBV24-1A0A075B6N3 115 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 TRAV3A0A0B4J244 114 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 PPIAL4CA0A0B4J2A2 164 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 H0YJW9 148 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 K7EQM0 130 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 C8orf88P0DMB2 117 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 PPIAL4GP0DN37 164 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 IGFBP2P18065 325 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 HOXA5P20719 270 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 CCKARP32238 428 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 RPL27AP46776 148 aaKnown RBP2.17□□□□□ -2.06
C9orf72-205ENST00000488117 PPOXP50336 477 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 ZNF134P52741 427 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 LGALS4P56470 323 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 RAB4BP61018 213 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 FAM53AQ6NSI3 398 aaPredicted RBP2.17□□□□□ -2.06
C9orf72-205ENST00000488117 SSX7Q7RTT5 188 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 MUC15Q8N387 334 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 TEX45Q8NA69 505 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 ST6GALNAC3Q8NDV1 305 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 OR4X1Q8NH49 305 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 TMEM167AQ8TBQ9 72 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 GATAD1Q8WUU5 269 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 NEU4Q8WWR8 484 aaPredicted RBP2.17□□□□□ -2.06
C9orf72-205ENST00000488117 SFRP2Q96HF1 295 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 SCRT1Q9BWW7 348 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 TMEM133Q9H2Q1 129 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 LINC00574Q9H8X3 128 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 MSRB2Q9Y3D2 182 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 FREM2Q5SZK8 3169 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 K7EM74 188 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 WISP2O76076 250 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 LIPFP07098 398 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 CXCL1P09341 107 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 IGHV1-8P0DP01 117 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 FABP4P15090 132 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 AREGP15514 252 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 CCL3L1P16619 93 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 COX7A1P24310 79 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 ATP5G3P48201 142 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 HOXA4Q00056 320 aaPredicted RBP2.17□□□□□ -2.06
C9orf72-205ENST00000488117 CD69Q07108 199 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 HES1Q14469 280 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 SPRNQ5BIV9 151 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 OR10D4PQ8NGN7 298 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 TMEM190Q8WZ59 177 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 DAZAP1Q96EP5 407 aaKnown RBP2.17□□□□□ -2.06
C9orf72-205ENST00000488117 KRTAP9-8Q9BYQ0 159 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 DNAJC4Q9NNZ3 241 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 JKAMPQ9P055 326 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 DOK5Q9P104 306 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 LY96Q9Y6Y9 160 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 CACNA1EQ15878 2313 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 TRBV9A0A0B4J1U6 114 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 FAM87AP0C7U9 286 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 LINC00869P0C866 280 aa2.17□□□□□ -2.06
C9orf72-205ENST00000488117 TRGC1P0CF51 173 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms