RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 OPN1MW3P0DN78 364 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 NPY1RP25929 384 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 RAB5CP51148 216 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 PRSS8Q16651 343 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 CCDC144NLQ6NUI1 221 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 OR2G3Q8NGZ4 309 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 HINT2Q9BX68 163 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 ENY2Q9NPA8 101 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 PARP11Q9NR21 331 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 UQCC1Q9NVA1 299 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 PFDN2Q9UHV9 154 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 NBPF19A0A087WUL8 3843 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 UBE2L5PA0A1B0GUS4 154 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 TEX46H3BTG2 121 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 TRIM77I1YAP6 450 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 CA2P00918 260 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 PAX6P26367 422 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 ATP5IP56385 69 aaPredicted RBP7.56□□□□□ -1.2
SF3B1-211ENST00000487698 LGALS4P56470 323 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 SSX2Q16385 188 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 FBLN7Q53RD9 439 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 C10orf55Q5SWW7 151 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 PXDC1Q5TGL8 231 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 ETV3LQ6ZN32 361 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 TMEM182Q6ZP80 229 aaPredicted RBP7.56□□□□□ -1.2
SF3B1-211ENST00000487698 HSD17B13Q7Z5P4 300 aaPredicted RBP7.56□□□□□ -1.2
SF3B1-211ENST00000487698 MMD2Q8IY49 270 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 LRRC75A-AS1Q8N1F1 130 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 EIF4E3Q8N5X7 224 aaKnown RBP7.56□□□□□ -1.2
SF3B1-211ENST00000487698 OR10W1Q8NGF6 305 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 LYPD6BQ8NI32 183 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 PSMG3Q9BT73 122 aaPredicted RBP7.56□□□□□ -1.2
SF3B1-211ENST00000487698 GGACTQ9BVM4 153 aa7.56□□□□□ -1.2
SF3B1-211ENST00000487698 CENPVL3A0A0U1RRI6 287 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 ANKRD34BA5PLL1 514 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 UMAD1C9J7I0 102 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 NDUFA3O95167 84 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 MOSP00540 346 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 IGKV1D-33P01593 117 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 IGKV1-33P01594 117 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 MSMBP08118 114 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 RNASE2P10153 161 aaKnown RBP7.55□□□□□ -1.2
SF3B1-211ENST00000487698 MAS1LP35410 378 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 SAA4P35542 130 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 RAB11AP62491 216 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 BLOC1S1P78537 153 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 DLK1P80370 383 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 SSBP2P81877 361 aaPredicted RBP7.55□□□□□ -1.2
SF3B1-211ENST00000487698 EBI3Q14213 229 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 AANATQ16613 207 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 DEFB113Q30KQ7 82 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 C2orf83Q53S99 150 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 SLC25A24Q6NUK1 477 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 Q6ZRG5 221 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 CENPVQ7Z7K6 275 aaPredicted RBP7.55□□□□□ -1.2
SF3B1-211ENST00000487698 PPP1R27Q86WC6 154 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 Q8N6K4 173 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 NPBQ8NG41 125 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 TAF15Q92804 592 aaKnown RBP eCLIP7.55□□□□□ -1.2
SF3B1-211ENST00000487698 MALSU1Q96EH3 234 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 EAF1Q96JC9 268 aaPredicted RBP7.55□□□□□ -1.2
SF3B1-211ENST00000487698 RSG1Q9BU20 258 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 METTL1Q9UBP6 276 aaKnown RBP7.55□□□□□ -1.2
SF3B1-211ENST00000487698 TIMM9Q9Y5J7 89 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 A0A1W2PN81 502 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 NPFFO15130 113 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 SNRNP70P08621 437 aaKnown RBP7.55□□□□□ -1.2
SF3B1-211ENST00000487698 CHRNA7P36544 502 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 COMPP49747 757 aaPredicted RBP7.55□□□□□ -1.2
SF3B1-211ENST00000487698 FHITP49789 147 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 F2RL1P55085 397 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 WT1-ASQ06250 92 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 BTNL8Q6UX41 500 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 SCGB1C1Q8TD33 95 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 FBXL15Q9H469 300 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 WDR83OSQ9Y284 106 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 GCN1Q92616 2671 aaKnown RBP7.55□□□□□ -1.2
SF3B1-211ENST00000487698 CREBBPQ92793 2442 aa7.55□□□□□ -1.2
SF3B1-211ENST00000487698 IGLC7A0M8Q6 106 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 B4DSR2 109 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 NBR2O15453 112 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 MMDQ15546 238 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 TUSC1Q2TAM9 212 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 OR2T10Q8NGZ9 312 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 MBD6Q96DN6 1003 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 SVEP1Q4LDE5 3571 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 NUDT19A8MXV4 375 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 FNDC10F2Z333 226 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 IFNA4P05014 189 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 FGF7P21781 194 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 CD24P25063 80 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 CAMLGP49069 296 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 SERF2P84101 59 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 TNXAQ16473 311 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 ARSJQ5FYB0 599 aaPredicted RBP7.54□□□□□ -1.2
SF3B1-211ENST00000487698 DPPA3Q6W0C5 159 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 NPCDR1Q9BY65 106 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 FBXO7Q9Y3I1 522 aa7.54□□□□□ -1.2
SF3B1-211ENST00000487698 IGHV1-69DA0A0B4J2H0 117 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 RAB19A4D1S5 217 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms