RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 GSKIPQ9P0R6 139 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 hCG_2014768A0A024R1R8 64 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 TEX22C9J3V5 150 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 ATP6V0E1O15342 81 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 APELAP0DMC3 54 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 RPL15P61313 204 aaKnown RBP10.05□□□□□ -0.8
HDAC6-229ENST00000486665 IL15RAQ13261 267 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 PRR31Q5SQ13 230 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 ASPHD1Q5U4P2 390 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 THOC7Q6I9Y2 204 aaKnown RBP10.05□□□□□ -0.8
HDAC6-229ENST00000486665 C11orf87Q6NUJ2 197 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 OR10W1Q8NGF6 305 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 ABHD5Q8WTS1 349 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 CHAC2Q8WUX2 184 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 ARPC1AQ92747 370 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 NOL4LQ96MY1 436 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-229ENST00000486665 SPIN2AQ99865 258 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 SPIN2BQ9BPZ2 258 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 HINT2Q9BX68 163 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 FKBP11Q9NYL4 201 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 WSB1Q9Y6I7 421 aa10.05□□□□□ -0.8
HDAC6-229ENST00000486665 PLXNB1O43157 2135 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 G3V318 75 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 NDUFA7O95182 113 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 IFNA17P01571 189 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 TRAPPC2P0DI81 140 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 TRAPPC2BP0DI82 140 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 SPCS3P61009 180 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 ID3Q02535 119 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 LFNGQ8NES3 379 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 OR5B3Q8NH48 314 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 OR52E5Q8NH55 327 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 ZNF747Q9BV97 191 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 MAGT1Q9H0U3 335 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 RBKSQ9H477 322 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 C16orf95Q9H693 158 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 SERTAD4Q9NUC0 356 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 HSPB7Q9UBY9 170 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 ZNF257Q9Y2Q1 563 aa10.04□□□□□ -0.8
HDAC6-229ENST00000486665 TNCP24821 2201 aa10.03□□□□□ -0.8
HDAC6-229ENST00000486665 IGF1P05019 195 aa10.03□□□□□ -0.8
HDAC6-229ENST00000486665 HKR1P10072 659 aa10.03□□□□□ -0.8
HDAC6-229ENST00000486665 AREGP15514 252 aa10.03□□□□□ -0.8
HDAC6-229ENST00000486665 VDAC2P45880 294 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-229ENST00000486665 CRIP2P52943 208 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-229ENST00000486665 PRCDQ00LT1 54 aa10.03□□□□□ -0.8
HDAC6-229ENST00000486665 WT1-ASQ06250 92 aa10.03□□□□□ -0.8
HDAC6-229ENST00000486665 TNFRSF9Q07011 255 aa10.03□□□□□ -0.8
HDAC6-229ENST00000486665 PDLIM3Q53GG5 364 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-229ENST00000486665 C19orf54Q5BKX5 351 aa10.03□□□□□ -0.8
HDAC6-229ENST00000486665 C19orf35Q6ZS72 473 aa10.03□□□□□ -0.8
HDAC6-229ENST00000486665 TRAV41A0A0B4J266 112 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 IGLC7A0M8Q6 106 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 AP4M1O00189 453 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 SCGB1D2O95969 90 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 MBPP02686 304 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-229ENST00000486665 REG1AP05451 166 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 NKX2-1P43699 371 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-229ENST00000486665 POLR2GP62487 172 aaKnown RBP eCLIP10.02□□□□□ -0.81
HDAC6-229ENST00000486665 SRSF4Q08170 494 aaKnown RBP10.02□□□□□ -0.81
HDAC6-229ENST00000486665 ECSCRQ19T08 205 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 ARSJQ5FYB0 599 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-229ENST00000486665 UNQ5815/PRO19632Q6UWF5 114 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 STPG2Q8N412 459 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 OR5T1Q8NG75 326 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 OR2T6Q8NHC8 308 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 LINC01006Q8NI28 216 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 PDCD10Q9BUL8 212 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 NMES1Q9C002 83 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 ZNF436Q9C0F3 470 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-229ENST00000486665 NOTCH1P46531 2555 aa10.02□□□□□ -0.81
HDAC6-229ENST00000486665 TET2Q6N021 2002 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-229ENST00000486665 CEBPZOSA8MTT3 80 aa10.01□□□□□ -0.81
HDAC6-229ENST00000486665 FAM90A26D6RGX4 464 aa10.01□□□□□ -0.81
HDAC6-229ENST00000486665 OR13C7P0DN81 318 aa10.01□□□□□ -0.81
HDAC6-229ENST00000486665 CFHR3Q02985 330 aa10.01□□□□□ -0.81
HDAC6-229ENST00000486665 AKIRIN2Q53H80 203 aa10.01□□□□□ -0.81
HDAC6-229ENST00000486665 C10orf99Q6UWK7 81 aa10.01□□□□□ -0.81
HDAC6-229ENST00000486665 WNT10AQ9GZT5 417 aa10.01□□□□□ -0.81
HDAC6-229ENST00000486665 PLEKHA3Q9HB20 300 aa10.01□□□□□ -0.81
HDAC6-229ENST00000486665 A0A1W2PN81 502 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 K7EPK0 472 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 SYNGR2O43760 224 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 SOX15O60248 233 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 TMEM50AO95807 157 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 CRYGCP07315 174 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 IAPPP10997 89 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 MDKP21741 143 aaPredicted RBP10□□□□□ -0.81
HDAC6-229ENST00000486665 PSMB6P28072 239 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 PPIFP30405 207 aaKnown RBP10□□□□□ -0.81
HDAC6-229ENST00000486665 CHRNA7P36544 502 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 HOXA1P49639 335 aaPredicted RBP10□□□□□ -0.81
HDAC6-229ENST00000486665 BCAP31P51572 246 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 DEFA6Q01524 100 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 TMEM267Q0VDI3 215 aaPredicted RBP10□□□□□ -0.81
HDAC6-229ENST00000486665 RAB32Q13637 225 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 SHISA2Q6UWI4 295 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 ZNF329Q86UD4 541 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 TTC9CQ8N5M4 171 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 OR2C3Q8N628 320 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms