RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 OAZ3Q9UMX2 235 aa10.62□□□□□ -0.71
U2AF1-211ENST00000486519 FAT3Q8TDW7 4589 aa10.62□□□□□ -0.71
U2AF1-211ENST00000486519 ST8SIA3O43173 380 aa10.61□□□□□ -0.71
U2AF1-211ENST00000486519 PAFAH1B2P68402 229 aa10.61□□□□□ -0.71
U2AF1-211ENST00000486519 Q56UQ5 140 aa10.61□□□□□ -0.71
U2AF1-211ENST00000486519 YIF1BQ5BJH7 314 aa10.61□□□□□ -0.71
U2AF1-211ENST00000486519 PLAC9Q5JTB6 97 aa10.61□□□□□ -0.71
U2AF1-211ENST00000486519 SLC25A24Q6NUK1 477 aa10.61□□□□□ -0.71
U2AF1-211ENST00000486519 DGCR14Q96DF8 476 aaKnown RBP10.61□□□□□ -0.71
U2AF1-211ENST00000486519 VSIRQ9H7M9 311 aa10.61□□□□□ -0.71
U2AF1-211ENST00000486519 CLEC2DQ9UHP7 191 aa10.61□□□□□ -0.71
U2AF1-211ENST00000486519 POMPQ9Y244 141 aa10.61□□□□□ -0.71
U2AF1-211ENST00000486519 IGKV1D-8A0A087WSZ0 117 aa10.6□□□□□ -0.71
U2AF1-211ENST00000486519 TRAV14DV4A0A0A6YYC5 116 aa10.6□□□□□ -0.71
U2AF1-211ENST00000486519 SAC3D1A6NKF1 404 aa10.6□□□□□ -0.71
U2AF1-211ENST00000486519 K7EQG2 157 aa10.6□□□□□ -0.71
U2AF1-211ENST00000486519 RPL11P62913 178 aaKnown RBP10.6□□□□□ -0.71
U2AF1-211ENST00000486519 WT1-ASQ06250 92 aa10.6□□□□□ -0.71
U2AF1-211ENST00000486519 H1FOOQ8IZA3 346 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-211ENST00000486519 NKAIN3Q8N8D7 197 aa10.6□□□□□ -0.71
U2AF1-211ENST00000486519 MYCBPQ99417 103 aaPredicted RBP10.6□□□□□ -0.71
U2AF1-211ENST00000486519 BABAM2Q9NXR7 383 aa10.6□□□□□ -0.71
U2AF1-211ENST00000486519 KCNK7Q9Y2U2 307 aa10.6□□□□□ -0.71
U2AF1-211ENST00000486519 ARL2BPQ9Y2Y0 163 aa10.6□□□□□ -0.71
U2AF1-211ENST00000486519 ZNF705FA8MVS1 300 aaPredicted RBP10.59□□□□□ -0.71
U2AF1-211ENST00000486519 UBBP0CG47 229 aa10.59□□□□□ -0.71
U2AF1-211ENST00000486519 ZNF705DP0CH99 300 aaPredicted RBP10.59□□□□□ -0.71
U2AF1-211ENST00000486519 ZNF705BP0CI00 300 aaPredicted RBP10.59□□□□□ -0.71
U2AF1-211ENST00000486519 EIF4EBP1Q13541 118 aaPredicted RBP10.59□□□□□ -0.71
U2AF1-211ENST00000486519 SMN1Q16637 294 aaKnown RBP10.59□□□□□ -0.71
U2AF1-211ENST00000486519 TIMM50Q3ZCQ8 353 aa10.59□□□□□ -0.71
U2AF1-211ENST00000486519 C1orf100Q5SVJ3 147 aa10.59□□□□□ -0.71
U2AF1-211ENST00000486519 ZNF705AQ6ZN79 300 aaPredicted RBP10.59□□□□□ -0.71
U2AF1-211ENST00000486519 LRRTM1Q86UE6 522 aa10.59□□□□□ -0.71
U2AF1-211ENST00000486519 FAM89BQ8N5H3 189 aa10.59□□□□□ -0.71
U2AF1-211ENST00000486519 GDPD1Q8N9F7 314 aa10.59□□□□□ -0.71
U2AF1-211ENST00000486519 VSTM2AQ8TAG5 236 aa10.59□□□□□ -0.71
U2AF1-211ENST00000486519 APH1BQ8WW43 257 aa10.59□□□□□ -0.71
U2AF1-211ENST00000486519 MRPS18AQ9NVS2 196 aaKnown RBP10.59□□□□□ -0.71
U2AF1-211ENST00000486519 THYN1Q9P016 225 aa10.59□□□□□ -0.71
U2AF1-211ENST00000486519 TRAV2A0A0B4J234 112 aa10.58□□□□□ -0.72
U2AF1-211ENST00000486519 FAM229AH3BQW9 127 aa10.58□□□□□ -0.72
U2AF1-211ENST00000486519 FCGR3AP08637 254 aa10.58□□□□□ -0.72
U2AF1-211ENST00000486519 ICAM4Q14773 271 aa10.58□□□□□ -0.72
U2AF1-211ENST00000486519 Q6ZRN7 208 aaPredicted RBP10.58□□□□□ -0.72
U2AF1-211ENST00000486519 FGF20Q9NP95 211 aaPredicted RBP10.58□□□□□ -0.72
U2AF1-211ENST00000486519 HSF4Q9ULV5 492 aa10.58□□□□□ -0.72
U2AF1-211ENST00000486519 RBMX2Q9Y388 322 aaKnown RBP10.58□□□□□ -0.72
U2AF1-211ENST00000486519 IGHV3OR16-12A0A075B7B8 117 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 IGKV1D-13A0A0B4J2D9 117 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 SNTNA6NMZ2 147 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 IGHV3-48P01763 117 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 OR13C7P0DN81 318 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 IGKV1-13P0DP09 117 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 C15orf53Q8NAA6 179 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 ZNF485Q8NCK3 441 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 STXBP6Q8NFX7 210 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 OR4S2Q8NH73 311 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 SPATA2Q9UM82 520 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 MRPS7Q9Y2R9 242 aaKnown RBP10.57□□□□□ -0.72
U2AF1-211ENST00000486519 PRELID3BQ9Y3B1 194 aa10.57□□□□□ -0.72
U2AF1-211ENST00000486519 RPS10-NUDT3A0A1W2PQS6 291 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 NUDT3O95989 172 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 SERPINE2P07093 398 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 CD37P11049 281 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 CALB2P22676 271 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 FXYD7P58549 80 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 P2RY14Q15391 338 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 CBR4Q8N4T8 237 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 RHOXF1Q8NHV9 184 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 TCTEX1D2Q8WW35 142 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 RAB40CQ96S21 281 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 NEU1Q99519 415 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 GINS4Q9BRT9 223 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 HRASLSQ9HDD0 168 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 ZNF446Q9NWS9 450 aa10.56□□□□□ -0.72
U2AF1-211ENST00000486519 TAS2R43P59537 309 aa10.55□□□□□ -0.72
U2AF1-211ENST00000486519 TOMM20LQ6UXN7 152 aa10.55□□□□□ -0.72
U2AF1-211ENST00000486519 DUSP18Q8NEJ0 188 aa10.55□□□□□ -0.72
U2AF1-211ENST00000486519 DCANP1Q8TF63 244 aa10.55□□□□□ -0.72
U2AF1-211ENST00000486519 NXF2Q9GZY0 626 aaKnown RBP10.55□□□□□ -0.72
U2AF1-211ENST00000486519 Q9H8V8 135 aa10.55□□□□□ -0.72
U2AF1-211ENST00000486519 BET1LQ9NYM9 111 aa10.55□□□□□ -0.72
U2AF1-211ENST00000486519 YTHDF2Q9Y5A9 579 aaKnown RBP10.55□□□□□ -0.72
U2AF1-211ENST00000486519 F11RQ9Y624 299 aaKnown RBP10.55□□□□□ -0.72
U2AF1-211ENST00000486519 ALPLP05186 524 aa10.54□□□□□ -0.72
U2AF1-211ENST00000486519 RELQ04864 619 aaPredicted RBP10.54□□□□□ -0.72
U2AF1-211ENST00000486519 OXA1LQ15070 435 aa10.54□□□□□ -0.72
U2AF1-211ENST00000486519 TMPRSS11AQ6ZMR5 421 aa10.54□□□□□ -0.72
U2AF1-211ENST00000486519 SSX7Q7RTT5 188 aa10.54□□□□□ -0.72
U2AF1-211ENST00000486519 GRAMD2BQ96HH9 432 aa10.54□□□□□ -0.72
U2AF1-211ENST00000486519 ATP6V0BQ99437 205 aa10.54□□□□□ -0.72
U2AF1-211ENST00000486519 GFI1Q99684 422 aa10.54□□□□□ -0.72
U2AF1-211ENST00000486519 ZFAND3Q9H8U3 227 aa10.54□□□□□ -0.72
U2AF1-211ENST00000486519 PGPEP1Q9NXJ5 209 aa10.54□□□□□ -0.72
U2AF1-211ENST00000486519 TAS2R8Q9NYW2 309 aa10.54□□□□□ -0.72
U2AF1-211ENST00000486519 DNAH8Q96JB1 4490 aa10.53□□□□□ -0.72
U2AF1-211ENST00000486519 TMEM189A5PLL7 270 aa10.53□□□□□ -0.72
U2AF1-211ENST00000486519 UPK2O00526 184 aa10.53□□□□□ -0.72
U2AF1-211ENST00000486519 BPNT1O95861 308 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms