RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 AK3Q9UIJ7 227 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 MGAT4AQ9UM21 535 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 FAT3Q8TDW7 4589 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 LRP2P98164 4655 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 A0A0A6YYD4 124 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 TEX48A0A1B0GUV7 120 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 K7EQG2 157 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 DNASE2O00115 360 aaPredicted RBP5.71□□□□□ -1.5
XRN1-212ENST00000486211 FKBP6O75344 327 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 CD5P06127 495 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 CTSGP08311 255 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 SRMP19623 302 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 CELP19835 753 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 GBX2P52951 348 aaPredicted RBP5.71□□□□□ -1.5
XRN1-212ENST00000486211 CCL18P55774 89 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 OR2B8PP59922 312 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 PLA2G7Q13093 441 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 TTC32Q5I0X7 151 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 ACTL10Q5JWF8 245 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 OR10K2Q6IF99 312 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 ARHGAP24Q8N264 748 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 DEFB104AQ8WTQ1 72 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 ST8SIA2Q92186 375 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 GRAMD2BQ96HH9 432 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 TM2D1Q9BX74 207 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 VSIRQ9H7M9 311 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 XCL2Q9UBD3 114 aa5.71□□□□□ -1.5
XRN1-212ENST00000486211 TRAV14DV4A0A0A6YYC5 116 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 IGHV3-21A0A0B4J1V1 117 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 A0A1W2PPQ1 181 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 SMIM9A6NGZ8 99 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 AQP12BA6NM10 295 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 TRDCB7Z8K6 153 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 FCGR3BO75015 233 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 APOHP02749 345 aaPredicted RBP5.7□□□□□ -1.5
XRN1-212ENST00000486211 HOXB6P17509 224 aaKnown RBP5.7□□□□□ -1.5
XRN1-212ENST00000486211 SERPINB10P48595 397 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 RPS11P62280 158 aaKnown RBP eCLIP5.7□□□□□ -1.5
XRN1-212ENST00000486211 RPL8P62917 257 aaKnown RBP5.7□□□□□ -1.5
XRN1-212ENST00000486211 USF2Q15853 346 aaPredicted RBP5.7□□□□□ -1.5
XRN1-212ENST00000486211 IGSF11Q5DX21 431 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 RPL22L1Q6P5R6 122 aaKnown RBP5.7□□□□□ -1.5
XRN1-212ENST00000486211 AQP12AQ8IXF9 295 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 VSTM2AQ8TAG5 236 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 SCARB1Q8WTV0 552 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 CCDC124Q96CT7 223 aaKnown RBP5.7□□□□□ -1.5
XRN1-212ENST00000486211 CIB1Q99828 191 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 DCUN1D5Q9BTE7 237 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 CABLES2Q9BTV7 478 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 GABARAPL3Q9BY60 117 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 C21orf62Q9NYP8 219 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 THYN1Q9P016 225 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 GHRLQ9UBU3 117 aa5.7□□□□□ -1.5
XRN1-212ENST00000486211 TRBV6-7A0A0A0MS04 114 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 K7EIM0 57 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 RAB27BO00194 218 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 ST8SIA3O43173 380 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 OXTP01178 125 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 IFNA5P01569 189 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 ZNF688P0C7X2 276 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 HLA-GP17693 338 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 FGF9P31371 208 aaPredicted RBP5.69□□□□□ -1.5
XRN1-212ENST00000486211 BRWD1-AS2P59051 145 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 LINC00315P59091 139 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 RPL30P62888 115 aaKnown RBP5.69□□□□□ -1.5
XRN1-212ENST00000486211 UNC119Q13432 240 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 ATP6AP1Q15904 470 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 CCDC58Q4VC31 144 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 OR2B11Q5JQS5 317 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 SSX7Q7RTT5 188 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 CBR4Q8N4T8 237 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 GDPD1Q8N9F7 314 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 DUSP18Q8NEJ0 188 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 NUDT10Q8NFP7 164 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 OR4A4PQ8NGN8 299 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 GGHQ92820 318 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 NUDT11Q96G61 164 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 MYCBPQ99417 103 aaPredicted RBP5.69□□□□□ -1.5
XRN1-212ENST00000486211 UQCC2Q9BRT2 126 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 C1QTNF4Q9BXJ3 329 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 TMEM59Q9BXS4 323 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 GABARAPL1Q9H0R8 117 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 KCNK15Q9H427 330 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 C12orf4Q9NQ89 552 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 PLEKHJ1Q9NW61 149 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 CKLFQ9UBR5 152 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 RABAC1Q9UI14 185 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 PUS1Q9Y606 427 aaKnown RBP eCLIP5.69□□□□□ -1.5
XRN1-212ENST00000486211 RFNGQ9Y644 331 aa5.69□□□□□ -1.5
XRN1-212ENST00000486211 IGHV3-66A0A0C4DH42 116 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 A0A1W2PPK0 400 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 RPS10-NUDT3A0A1W2PQS6 291 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 FOXI3A8MTJ6 420 aaPredicted RBP5.68□□□□□ -1.5
XRN1-212ENST00000486211 BET1O15155 118 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 SOCS1O15524 211 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 OGG1O15527 345 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 FABP7O15540 132 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 YIF1AO95070 293 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 NUDT3O95989 172 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms