RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 TMEM68Q96MH6 324 aa12.44□□□□□ -0.42
APOE-205ENST00000485628 MGAT4CQ9UBM8 478 aa12.44□□□□□ -0.42
APOE-205ENST00000485628 C5orf51A6NDU8 294 aa12.43□□□□□ -0.42
APOE-205ENST00000485628 AP4M1O00189 453 aa12.43□□□□□ -0.42
APOE-205ENST00000485628 ACTL6BO94805 426 aa12.43□□□□□ -0.42
APOE-205ENST00000485628 BRI3O95415 125 aa12.43□□□□□ -0.42
APOE-205ENST00000485628 MBPP02686 304 aaPredicted RBP12.43□□□□□ -0.42
APOE-205ENST00000485628 WT1-ASQ06250 92 aa12.43□□□□□ -0.42
APOE-205ENST00000485628 TTC9CQ8N5M4 171 aa12.43□□□□□ -0.42
APOE-205ENST00000485628 OR10W1Q8NGF6 305 aa12.43□□□□□ -0.42
APOE-205ENST00000485628 LINC01006Q8NI28 216 aa12.43□□□□□ -0.42
APOE-205ENST00000485628 FAM103A1Q9BTL3 118 aaKnown RBP12.43□□□□□ -0.42
APOE-205ENST00000485628 ATRQ13535 2644 aa12.43□□□□□ -0.42
APOE-205ENST00000485628 C13orf42A0A1B0GVH6 325 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 NPIPB5A8MRT5 1133 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 CNIH1O95406 144 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 OPN1MWP04001 364 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 CRYBA1P05813 215 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 OPN1MW2P0DN77 364 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 OPN1MW3P0DN78 364 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 CTRB1P17538 263 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 GNB1P62873 340 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 CYCSP99999 105 aaKnown RBP12.42□□□□□ -0.42
APOE-205ENST00000485628 CTRB2Q6GPI1 263 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 HSD17B13Q7Z5P4 300 aaPredicted RBP12.42□□□□□ -0.42
APOE-205ENST00000485628 STPG2Q8N412 459 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 OR1S1Q8NH92 325 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 ASB13Q8WXK3 278 aa12.42□□□□□ -0.42
APOE-205ENST00000485628 NOL4LQ96MY1 436 aaPredicted RBP12.42□□□□□ -0.42
APOE-205ENST00000485628 ZNF436Q9C0F3 470 aaPredicted RBP12.42□□□□□ -0.42
APOE-205ENST00000485628 RCL1Q9Y2P8 373 aaKnown RBP12.42□□□□□ -0.42
APOE-205ENST00000485628 G3V318 75 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 SOX15O60248 233 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 TMEM50AO95807 157 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 IGLV1-40P01703 118 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 AREGP15514 252 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 NKX2-1P43699 371 aaPredicted RBP12.41□□□□□ -0.42
APOE-205ENST00000485628 PAX9P55771 341 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 TMEM95Q3KNT9 176 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 OR2C3Q8N628 320 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 ZNF114Q8NC26 417 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 LFNGQ8NES3 379 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 RBKSQ9H477 322 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 PARP11Q9NR21 331 aa12.41□□□□□ -0.42
APOE-205ENST00000485628 FBN1P35555 2871 aaKnown RBP12.4□□□□□ -0.42
APOE-205ENST00000485628 TRAV41A0A0B4J266 112 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 A0A1W2PN81 502 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 TMEM89A2RUT3 159 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 FAM25EA8MYX2 175 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 G3V3Q6 166 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 K7EPK0 472 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 SYNGR2O43760 224 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 IFNA17P01571 189 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 GIPP09681 153 aaPredicted RBP12.4□□□□□ -0.42
APOE-205ENST00000485628 CHRNA7P36544 502 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 BCAP31P51572 246 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 PROK1P58294 105 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 C9orf152Q5JTZ5 239 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 RNF152Q8N8N0 203 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 OR2T6Q8NHC8 308 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 GRPEL2Q8TAA5 225 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 RNF126Q9BV68 326 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 GSKIPQ9P0R6 139 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 DMRT1Q9Y5R6 373 aa12.4□□□□□ -0.42
APOE-205ENST00000485628 H0YIZ8 118 aa12.39□□□□□ -0.43
APOE-205ENST00000485628 RBMXL2O75526 392 aaKnown RBP12.39□□□□□ -0.43
APOE-205ENST00000485628 IGHG4P01861 327 aa12.39□□□□□ -0.43
APOE-205ENST00000485628 PSMB6P28072 239 aa12.39□□□□□ -0.43
APOE-205ENST00000485628 POLR2GP62487 172 aaKnown RBP eCLIP12.39□□□□□ -0.43
APOE-205ENST00000485628 TMEM267Q0VDI3 215 aaPredicted RBP12.39□□□□□ -0.43
APOE-205ENST00000485628 RAB32Q13637 225 aa12.39□□□□□ -0.43
APOE-205ENST00000485628 KRTAP24-1Q3LI83 254 aa12.39□□□□□ -0.43
APOE-205ENST00000485628 C11orf87Q6NUJ2 197 aa12.39□□□□□ -0.43
APOE-205ENST00000485628 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.39□□□□□ -0.43
APOE-205ENST00000485628 FAM110DQ8TAY7 271 aaPredicted RBP12.39□□□□□ -0.43
APOE-205ENST00000485628 TMEM170AQ8WVE7 144 aa12.39□□□□□ -0.43
APOE-205ENST00000485628 PPP1R1CQ8WVI7 109 aa12.39□□□□□ -0.43
APOE-205ENST00000485628 LINC00527Q9UJ94 153 aa12.39□□□□□ -0.43
APOE-205ENST00000485628 TRBV9A0A0B4J1U6 114 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 CLPSL1A2RUU4 121 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 FBXO24O75426 580 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 MED6O75586 246 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 LY86O95711 162 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 OR13C7P0DN81 318 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 LYL1P12980 280 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 MFAP2P55001 183 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 TAS2R30P59541 319 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 RAP2BP61225 183 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 SPINK9Q5DT21 86 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 UNQ5815/PRO19632Q6UWF5 114 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 OR4F5Q8NH21 305 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 MYOZ3Q8TDC0 251 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 DTD1Q8TEA8 209 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 ST6GAL2Q96JF0 529 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 SMIM8Q96KF7 97 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 FANCD2OSQ96PS1 177 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 P2RX4Q99571 388 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 PDCD10Q9BUL8 212 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 MAGT1Q9H0U3 335 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 PLEKHA3Q9HB20 300 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms