RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 KIR2DL5BA0A0G2JPC4 375 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 H3BMQ9 156 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 HPGDSO60760 199 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 IGLV2-14P01704 120 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 IGKV1-13P0DP09 117 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 ELK1P19419 428 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 TAS2R20P59543 309 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 GNG2P59768 71 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 CNIH2Q6PI25 160 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 ZNF66Q6ZN08 573 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 KIR2DL5AQ8N109 375 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 MFSD4AQ8N468 514 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 RPP25LQ8N5L8 163 aaKnown RBP10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 GVQW1Q8N7I0 195 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 OR4A5Q8NH83 315 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 KIR2DL5BQ8NHK3 375 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 DYNC2LI1Q8TCX1 351 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 BCL7BQ9BQE9 202 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 AIFM2Q9BRQ8 373 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 C5orf66Q9H5L9 145 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 TAS2R8Q9NYW2 309 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 ANAPC10Q9UM13 185 aa10.21□□□□□ -0.77
SMARCD3-211ENST00000485592 IGHV3-35A0A0C4DH35 117 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 CYB5BO43169 146 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 APOA1P02647 267 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 ZNF182P17025 639 aaPredicted RBP10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 HLA-GP17693 338 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 LAMTOR1Q6IAA8 161 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 ZNF502Q8TBZ5 544 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 RNF183Q96D59 192 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 S100A16Q96FQ6 103 aaKnown RBP10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 CMTM3Q96MX0 182 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 MIXL1Q9H2W2 232 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 HRASLSQ9HDD0 168 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 DIABLOQ9NR28 239 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 BET1LQ9NYM9 111 aa10.2□□□□□ -0.78
SMARCD3-211ENST00000485592 TSPAN4O14817 238 aa10.19□□□□□ -0.78
SMARCD3-211ENST00000485592 DEDDO75618 318 aa10.19□□□□□ -0.78
SMARCD3-211ENST00000485592 EIF4EBP1Q13541 118 aaPredicted RBP10.19□□□□□ -0.78
SMARCD3-211ENST00000485592 TMEM69Q5SWH9 247 aa10.19□□□□□ -0.78
SMARCD3-211ENST00000485592 LGALS9CQ6DKI2 356 aa10.19□□□□□ -0.78
SMARCD3-211ENST00000485592 HOGA1Q86XE5 327 aa10.19□□□□□ -0.78
SMARCD3-211ENST00000485592 PHLDA1Q8WV24 401 aaPredicted RBP10.19□□□□□ -0.78
SMARCD3-211ENST00000485592 ZNF436Q9C0F3 470 aaPredicted RBP10.19□□□□□ -0.78
SMARCD3-211ENST00000485592 CCDC59Q9P031 241 aaKnown RBP10.19□□□□□ -0.78
SMARCD3-211ENST00000485592 ANXA10Q9UJ72 324 aa10.19□□□□□ -0.78
SMARCD3-211ENST00000485592 FRAS1Q86XX4 4008 aa10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 MEIS3P1A6NDR6 274 aa10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 OR4C46A6NHA9 309 aa10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 TGOLN2O43493 480 aa10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 FCER2P06734 321 aa10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 RPL35AP18077 110 aaKnown RBP10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 PTBP1P26599 531 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 BRWD1-AS2P59051 145 aa10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 BEST4Q8NFU0 473 aa10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 TMEM190Q8WZ59 177 aa10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 AP3S1Q92572 193 aa10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 GALNT14Q96FL9 552 aa10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 SRSF8Q9BRL6 282 aaKnown RBP10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 COMMD5Q9GZQ3 224 aa10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 SLIRPQ9GZT3 109 aaKnown RBP10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 C6orf62Q9GZU0 229 aaPredicted RBP10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 DAZ1Q9NQZ3 744 aaKnown RBP10.18□□□□□ -0.78
SMARCD3-211ENST00000485592 CGB1A6NKQ9 187 aa10.17□□□□□ -0.78
SMARCD3-211ENST00000485592 TNFSF12O43508 249 aa10.17□□□□□ -0.78
SMARCD3-211ENST00000485592 OR2B8PP59922 312 aa10.17□□□□□ -0.78
SMARCD3-211ENST00000485592 CATR1Q13166 79 aa10.17□□□□□ -0.78
SMARCD3-211ENST00000485592 ODF3L2Q3SX64 289 aa10.17□□□□□ -0.78
SMARCD3-211ENST00000485592 SPAG16Q8N0X2 631 aa10.17□□□□□ -0.78
SMARCD3-211ENST00000485592 VN1R17PQ8TDU5 208 aa10.17□□□□□ -0.78
SMARCD3-211ENST00000485592 SECTM1Q8WVN6 248 aa10.17□□□□□ -0.78
SMARCD3-211ENST00000485592 BSCL2Q96G97 398 aaPredicted RBP10.17□□□□□ -0.78
SMARCD3-211ENST00000485592 IGLC7A0M8Q6 106 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 OR2T8A6NH00 312 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 CTDSP2O14595 271 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 HPRT1P00492 218 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 RPA2P15927 270 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 NAT1P18440 290 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 TAS2R31P59538 309 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 ARPC4P59998 168 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 MSMO1Q15800 293 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 THOC7Q6I9Y2 204 aaKnown RBP10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 ZBTB34Q8NCN2 500 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 GPX8Q8TED1 209 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 GPHA2Q96T91 129 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 QTRT1Q9BXR0 403 aaKnown RBP10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 KMT2AQ03164 3969 aa10.16□□□□□ -0.78
SMARCD3-211ENST00000485592 NDUFA4O00483 81 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 UPK2O00526 184 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 RBFOX2O43251 390 aaKnown RBP eCLIP10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 NQO2P16083 231 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 FCGR2BP31994 310 aaPredicted RBP10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 MZT2AQ6P582 158 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 SPSB3Q6PJ21 355 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 HSD17B13Q7Z5P4 300 aaPredicted RBP10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 SNX29P2Q8IUI4 249 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 GDPD1Q8N9F7 314 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 DMBX1Q8NFW5 382 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 OR5B3Q8NH48 314 aa10.15□□□□□ -0.78
SMARCD3-211ENST00000485592 C20orf24Q9BUV8 137 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms