RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 OR13C7P0DN81 318 aa14.32□□□□□ -0.12
COL27A1-205ENST00000485397 GNRHRP30968 328 aa14.32□□□□□ -0.12
COL27A1-205ENST00000485397 SLC25A24Q6NUK1 477 aa14.32□□□□□ -0.12
COL27A1-205ENST00000485397 OR2C3Q8N628 320 aa14.32□□□□□ -0.12
COL27A1-205ENST00000485397 TMEM190Q8WZ59 177 aa14.32□□□□□ -0.12
COL27A1-205ENST00000485397 YTHDF1Q9BYJ9 559 aaKnown RBP14.32□□□□□ -0.12
COL27A1-205ENST00000485397 IGHV3-21A0A0B4J1V1 117 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 OR2T8A6NH00 312 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 TRAPPC2P0DI81 140 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 TRAPPC2BP0DI82 140 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 CBX5P45973 191 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 WT1-ASQ06250 92 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 PMS2P11Q13670 270 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 GDPD1Q8N9F7 314 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 CD300LFQ8TDQ1 290 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 VN1R17PQ8TDU5 208 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 C5orf66Q9H5L9 145 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 COMMD9Q9P000 198 aa14.31□□□□□ -0.12
COL27A1-205ENST00000485397 A0A0J9YWU9 116 aa14.3□□□□□ -0.12
COL27A1-205ENST00000485397 SERPINE2P07093 398 aa14.3□□□□□ -0.12
COL27A1-205ENST00000485397 MFAP2P55001 183 aa14.3□□□□□ -0.12
COL27A1-205ENST00000485397 HERV-K104P61576 105 aa14.3□□□□□ -0.12
COL27A1-205ENST00000485397 EWSR1Q01844 656 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL27A1-205ENST00000485397 SLC38A6Q8IZM9 456 aa14.3□□□□□ -0.12
COL27A1-205ENST00000485397 EHFQ9NZC4 300 aa14.3□□□□□ -0.12
COL27A1-205ENST00000485397 NSG2Q9Y328 171 aa14.3□□□□□ -0.12
COL27A1-205ENST00000485397 ATP6V1G2O95670 118 aa14.29□□□□□ -0.12
COL27A1-205ENST00000485397 FGF2P09038 288 aa14.29□□□□□ -0.12
COL27A1-205ENST00000485397 RFX2P48378 723 aa14.29□□□□□ -0.12
COL27A1-205ENST00000485397 THOC7Q6I9Y2 204 aaKnown RBP14.29□□□□□ -0.12
COL27A1-205ENST00000485397 OR1L8Q8NGR8 309 aa14.29□□□□□ -0.12
COL27A1-205ENST00000485397 LINC00476Q8WZB0 136 aa14.29□□□□□ -0.12
COL27A1-205ENST00000485397 SPAG8Q99932 426 aaPredicted RBP14.29□□□□□ -0.12
COL27A1-205ENST00000485397 CHRDL1Q9BU40 450 aa14.29□□□□□ -0.12
COL27A1-205ENST00000485397 HINT2Q9BX68 163 aa14.29□□□□□ -0.12
COL27A1-205ENST00000485397 Q9H521 79 aa14.29□□□□□ -0.12
COL27A1-205ENST00000485397 IFT46Q9NQC8 304 aa14.29□□□□□ -0.12
COL27A1-205ENST00000485397 IGHV3OR16-8A0A075B7F1 116 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 CXorf65A6NEN9 183 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 MARCH11A6NNE9 402 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 TSPAN4O14817 238 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 CYB5BO43169 146 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 XRCC3O43542 346 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 PGLYRP1O75594 196 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-205ENST00000485397 RLN1P04808 185 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 F2RP25116 425 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 LPAR6P43657 344 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 ERVK-16P61578 105 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 NEDD8Q15843 81 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 WFDC3Q8IUB2 231 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 BSCL2Q96G97 398 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-205ENST00000485397 ZNF2Q9BSG1 426 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-205ENST00000485397 DAZ1Q9NQZ3 744 aaKnown RBP14.28□□□□□ -0.12
COL27A1-205ENST00000485397 NDUFA4L2Q9NRX3 87 aa14.28□□□□□ -0.12
COL27A1-205ENST00000485397 F11RQ9Y624 299 aaKnown RBP14.28□□□□□ -0.12
COL27A1-205ENST00000485397 F8W735 103 aaPredicted RBP14.27□□□□□ -0.13
COL27A1-205ENST00000485397 SPRY2O43597 315 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 ZNF207O43670 478 aaKnown RBP14.27□□□□□ -0.13
COL27A1-205ENST00000485397 KRASP01116 189 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 PMP2P02689 132 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 TGFBR1P36897 503 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 APOC4P55056 127 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 DEFB135Q30KP9 77 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 ODF3L2Q3SX64 289 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 DHRS11Q6UWP2 260 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 Q6ZWC4 215 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 HSD17B13Q7Z5P4 300 aaPredicted RBP14.27□□□□□ -0.13
COL27A1-205ENST00000485397 LYG2Q86SG7 212 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 SCARB1Q8WTV0 552 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 FCAMRQ8WWV6 532 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 MOB3AQ96BX8 217 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 C20orf24Q9BUV8 137 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 C21orf62Q9NYP8 219 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 OR51B2Q9Y5P1 312 aa14.27□□□□□ -0.13
COL27A1-205ENST00000485397 K7EIM0 57 aa14.26□□□□□ -0.13
COL27A1-205ENST00000485397 NDUFA4O00483 81 aa14.26□□□□□ -0.13
COL27A1-205ENST00000485397 LY6G6CO95867 125 aa14.26□□□□□ -0.13
COL27A1-205ENST00000485397 BMI1P35226 326 aa14.26□□□□□ -0.13
COL27A1-205ENST00000485397 ADMP35318 185 aa14.26□□□□□ -0.13
COL27A1-205ENST00000485397 G6PCP35575 357 aa14.26□□□□□ -0.13
COL27A1-205ENST00000485397 LAMTOR1Q6IAA8 161 aa14.26□□□□□ -0.13
COL27A1-205ENST00000485397 UBAC2Q8NBM4 344 aa14.26□□□□□ -0.13
COL27A1-205ENST00000485397 BORCS5Q969J3 196 aa14.26□□□□□ -0.13
COL27A1-205ENST00000485397 LSM10Q969L4 123 aaKnown RBP14.26□□□□□ -0.13
COL27A1-205ENST00000485397 DGCR14Q96DF8 476 aaKnown RBP14.26□□□□□ -0.13
COL27A1-205ENST00000485397 S100A16Q96FQ6 103 aaKnown RBP14.26□□□□□ -0.13
COL27A1-205ENST00000485397 ANAPC10Q9UM13 185 aa14.26□□□□□ -0.13
COL27A1-205ENST00000485397 TP53TG1Q9Y2A0 90 aa14.26□□□□□ -0.13
COL27A1-205ENST00000485397 RPL35AP18077 110 aaKnown RBP14.25□□□□□ -0.13
COL27A1-205ENST00000485397 TNFRSF9Q07011 255 aa14.25□□□□□ -0.13
COL27A1-205ENST00000485397 SPSB3Q6PJ21 355 aa14.25□□□□□ -0.13
COL27A1-205ENST00000485397 FXYD6Q9H0Q3 95 aa14.25□□□□□ -0.13
COL27A1-205ENST00000485397 DBX1A6NMT0 343 aa14.24□□□□□ -0.13
COL27A1-205ENST00000485397 SNAPC5O75971 98 aa14.24□□□□□ -0.13
COL27A1-205ENST00000485397 CTSDP07339 412 aaPredicted RBP14.24□□□□□ -0.13
COL27A1-205ENST00000485397 TAS2R20P59543 309 aa14.24□□□□□ -0.13
COL27A1-205ENST00000485397 Q56UQ5 140 aa14.24□□□□□ -0.13
COL27A1-205ENST00000485397 OR5H2Q8NGV7 314 aa14.24□□□□□ -0.13
COL27A1-205ENST00000485397 ZNF414Q96IQ9 312 aa14.24□□□□□ -0.13
COL27A1-205ENST00000485397 NUPR2A6NF83 97 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms