RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 NDUFA4O00483 81 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 CHEK1O14757 476 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 SLC22A5O76082 557 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 HRASP01112 189 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 CTSGP08311 255 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 GADD45AP24522 165 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 TFPI2P48307 235 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 TCTAP57738 103 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 HACD4Q5VWC8 232 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 CNIH2Q6PI25 160 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 ZNF66Q6ZN08 573 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 LINC00336Q6ZUF6 198 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 Q8NAQ8 132 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 OR4A5Q8NH83 315 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 NUDCD2Q8WVJ2 157 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 K7EIM0 57 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 SULT1C2O00338 296 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 SERPINE2P07093 398 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 CTXN2P0C2S0 81 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 OR13C7P0DN81 318 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 MLLT11Q13015 90 aaPredicted RBP9.35□□□□□ -0.91
UBR4-213ENST00000483922 TRAM1Q15629 374 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 SSX1Q16384 188 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 POU2AF1Q16633 256 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 OGFRL1Q5TC84 451 aaPredicted RBP9.35□□□□□ -0.91
UBR4-213ENST00000483922 SLC25A24Q6NUK1 477 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 SPAG16Q8N0X2 631 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 FAM24BQ8N5W8 94 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 BSCL2Q96G97 398 aaPredicted RBP9.35□□□□□ -0.91
UBR4-213ENST00000483922 CENPOQ9BU64 300 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 RHPN1-AS1Q9BWJ2 59 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 SCRT1Q9BWW7 348 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 ATG5Q9H1Y0 275 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 HRASLSQ9HDD0 168 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 C8orf4Q9NR00 106 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 ANXA10Q9UJ72 324 aa9.35□□□□□ -0.91
UBR4-213ENST00000483922 APOBP04114 4563 aaKnown RBP9.34□□□□□ -0.91
UBR4-213ENST00000483922 IGKV3-7A0A075B6H7 116 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 IGHV3OR16-13A0A075B7E8 117 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 ELOA3CA0A087WX78 387 aaPredicted RBP9.34□□□□□ -0.91
UBR4-213ENST00000483922 IGHV3-74A0A0B4J1X5 117 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 TRAV1-2A0A0B4J238 106 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 IGHV7-4-1A0A0J9YVY3 117 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 TMEM235A6NFC5 223 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 APOHP02749 345 aaPredicted RBP9.34□□□□□ -0.91
UBR4-213ENST00000483922 GBGT1Q8N5D6 347 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 GDPD1Q8N9F7 314 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 MGLLQ99685 303 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 SRSF8Q9BRL6 282 aaKnown RBP9.34□□□□□ -0.91
UBR4-213ENST00000483922 DCSTAMPQ9H295 470 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 NDUFA4L2Q9NRX3 87 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 C21orf62Q9NYP8 219 aa9.34□□□□□ -0.91
UBR4-213ENST00000483922 IGHV4-4A0A075B6R2 117 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 SMIM30A4D0T7 59 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 METTL21EPA6NDL7 271 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 PRSS29PA6NIE9 313 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 C15orf62A8K5M9 175 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 CA1P00915 261 aaPredicted RBP9.33□□□□□ -0.92
UBR4-213ENST00000483922 PSMA1P25786 263 aaKnown RBP9.33□□□□□ -0.92
UBR4-213ENST00000483922 HLA-DMBP28068 263 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 TAS2R31P59538 309 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 RCN1Q15293 331 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 Q6ZTC4 211 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 OR10C1Q96KK4 312 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 COMMD5Q9GZQ3 224 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 HRH4Q9H3N8 390 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 TMEM140Q9NV12 185 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 THYN1Q9P016 225 aa9.33□□□□□ -0.92
UBR4-213ENST00000483922 IGHV4-28A0A0C4DH34 117 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 DBX1A6NMT0 343 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 CASQ2O14958 399 aaPredicted RBP9.32□□□□□ -0.92
UBR4-213ENST00000483922 RBFOX2O43251 390 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBR4-213ENST00000483922 HPRT1P00492 218 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 FCGR2CP31995 323 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 TMEM187Q14656 261 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 LEMD1Q68G75 181 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 SPSB3Q6PJ21 355 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 TMEM116Q8NCL8 245 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 SECTM1Q8WVN6 248 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 QTRT1Q9BXR0 403 aaKnown RBP9.32□□□□□ -0.92
UBR4-213ENST00000483922 ACOT13Q9NPJ3 140 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 NSG2Q9Y328 171 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 F11RQ9Y624 299 aaKnown RBP9.32□□□□□ -0.92
UBR4-213ENST00000483922 X6R8D5 127 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 DNAH5Q8TE73 4624 aa9.32□□□□□ -0.92
UBR4-213ENST00000483922 C15orf61A6NNL5 157 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 C11orf94C9JXX5 98 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 M0R2N4 97 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 TRAPPC2P0DI81 140 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 TRAPPC2BP0DI82 140 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 NQO2P16083 231 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 RAB3BP20337 219 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 ZNF818PQ6ZRF7 136 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 UBAC2Q8NBM4 344 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 OR13F1Q8NGS4 319 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 ATP6V0BQ99437 205 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 C6orf62Q9GZU0 229 aaPredicted RBP9.31□□□□□ -0.92
UBR4-213ENST00000483922 SCN3BQ9NY72 215 aa9.31□□□□□ -0.92
UBR4-213ENST00000483922 PDCD5O14737 125 aa9.3□□□□□ -0.92
UBR4-213ENST00000483922 IGHV3-48P01763 117 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms