RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SERPINE2P07093 398 aa13.43□□□□□ -0.26
ATG4B-221ENST00000483778 PTBP1P26599 531 aaKnown RBP eCLIP13.43□□□□□ -0.266e-9■■■■□ 20.1
ATG4B-221ENST00000483778 LPAR6P43657 344 aa13.43□□□□□ -0.26
ATG4B-221ENST00000483778 CBX5P45973 191 aa13.43□□□□□ -0.26
ATG4B-221ENST00000483778 SLC25A24Q6NUK1 477 aa13.43□□□□□ -0.26
ATG4B-221ENST00000483778 PLET1Q6UQ28 207 aa13.43□□□□□ -0.26
ATG4B-221ENST00000483778 SLC16A13Q7RTY0 426 aa13.43□□□□□ -0.26
ATG4B-221ENST00000483778 FCAMRQ8WWV6 532 aa13.43□□□□□ -0.26
ATG4B-221ENST00000483778 ZNF414Q96IQ9 312 aa13.43□□□□□ -0.26
ATG4B-221ENST00000483778 ZNF2Q9BSG1 426 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-221ENST00000483778 CHRDL1Q9BU40 450 aa13.43□□□□□ -0.26
ATG4B-221ENST00000483778 ZNF436Q9C0F3 470 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-221ENST00000483778 OR2T8A6NH00 312 aa13.42□□□□□ -0.26
ATG4B-221ENST00000483778 DBX1A6NMT0 343 aa13.42□□□□□ -0.26
ATG4B-221ENST00000483778 F8W735 103 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-221ENST00000483778 KRASP01116 189 aa13.42□□□□□ -0.26
ATG4B-221ENST00000483778 TRAPPC2P0DI81 140 aa13.42□□□□□ -0.26
ATG4B-221ENST00000483778 TRAPPC2BP0DI82 140 aa13.42□□□□□ -0.26
ATG4B-221ENST00000483778 HERV-K104P61576 105 aa13.42□□□□□ -0.26
ATG4B-221ENST00000483778 EWSR1Q01844 656 aaKnown RBP eCLIP13.42□□□□□ -0.26
ATG4B-221ENST00000483778 MOB3AQ96BX8 217 aa13.42□□□□□ -0.26
ATG4B-221ENST00000483778 YIPF6Q96EC8 236 aa13.42□□□□□ -0.26
ATG4B-221ENST00000483778 S100A16Q96FQ6 103 aaKnown RBP13.42□□□□□ -0.26
ATG4B-221ENST00000483778 IFT46Q9NQC8 304 aa13.42□□□□□ -0.26
ATG4B-221ENST00000483778 NDUFA4L2Q9NRX3 87 aa13.42□□□□□ -0.26
ATG4B-221ENST00000483778 ZNF207O43670 478 aaKnown RBP13.41□□□□□ -0.26
ATG4B-221ENST00000483778 NAT1P18440 290 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 F2RP25116 425 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 G6PCP35575 357 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 TAS2R20P59543 309 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 KCTD21Q4G0X4 260 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 SAMD12Q8N8I0 201 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 GDPD1Q8N9F7 314 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 OR1L8Q8NGR8 309 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 SRSF8Q9BRL6 282 aaKnown RBP13.41□□□□□ -0.26
ATG4B-221ENST00000483778 HINT2Q9BX68 163 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 FXYD6Q9H0Q3 95 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 COMMD9Q9P000 198 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 MRPL27Q9P0M9 148 aaKnown RBP13.41□□□□□ -0.26
ATG4B-221ENST00000483778 UBQLN2Q9UHD9 624 aa13.41□□□□□ -0.26
ATG4B-221ENST00000483778 MARCH11A6NNE9 402 aa13.4□□□□□ -0.26
ATG4B-221ENST00000483778 TGOLN2O43493 480 aa13.4□□□□□ -0.26
ATG4B-221ENST00000483778 ADMP35318 185 aa13.4□□□□□ -0.26
ATG4B-221ENST00000483778 UBE2NLQ5JXB2 153 aa13.4□□□□□ -0.26
ATG4B-221ENST00000483778 CD300LFQ8TDQ1 290 aa13.4□□□□□ -0.26
ATG4B-221ENST00000483778 VN1R17PQ8TDU5 208 aa13.4□□□□□ -0.26
ATG4B-221ENST00000483778 DGCR14Q96DF8 476 aaKnown RBP13.4□□□□□ -0.26
ATG4B-221ENST00000483778 GGTLC1Q9BX51 225 aa13.4□□□□□ -0.26
ATG4B-221ENST00000483778 LOC102724200A0A096LPH7 203 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-221ENST00000483778 TRAV25A0A0B4J276 109 aa13.39□□□□□ -0.27
ATG4B-221ENST00000483778 K7EIM0 57 aa13.39□□□□□ -0.27
ATG4B-221ENST00000483778 EIF4EP06730 217 aaKnown RBP13.39□□□□□ -0.27
ATG4B-221ENST00000483778 ELLP55199 621 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-221ENST00000483778 RBPMS2Q6ZRY4 209 aaKnown RBP13.39□□□□□ -0.27
ATG4B-221ENST00000483778 SCARB1Q8WTV0 552 aa13.39□□□□□ -0.27
ATG4B-221ENST00000483778 TMEM190Q8WZ59 177 aa13.39□□□□□ -0.27
ATG4B-221ENST00000483778 MARC2Q969Z3 335 aa13.39□□□□□ -0.27
ATG4B-221ENST00000483778 UFC1Q9Y3C8 167 aa13.39□□□□□ -0.27
ATG4B-221ENST00000483778 OR51B2Q9Y5P1 312 aa13.39□□□□□ -0.27
ATG4B-221ENST00000483778 F11RQ9Y624 299 aaKnown RBP13.39□□□□□ -0.27
ATG4B-221ENST00000483778 PLECQ15149 4684 aaKnown RBP13.39□□□□□ -0.27
ATG4B-221ENST00000483778 FGF2P09038 288 aa13.38□□□□□ -0.27
ATG4B-221ENST00000483778 HLA-DMAP28067 261 aa13.38□□□□□ -0.27
ATG4B-221ENST00000483778 PHLDA2Q53GA4 152 aa13.38□□□□□ -0.27
ATG4B-221ENST00000483778 TMEM69Q5SWH9 247 aa13.38□□□□□ -0.27
ATG4B-221ENST00000483778 OR2C3Q8N628 320 aa13.38□□□□□ -0.27
ATG4B-221ENST00000483778 OR1L6Q8NGR2 347 aa13.38□□□□□ -0.27
ATG4B-221ENST00000483778 OR5H2Q8NGV7 314 aa13.38□□□□□ -0.27
ATG4B-221ENST00000483778 IL17DQ8TAD2 202 aa13.38□□□□□ -0.27
ATG4B-221ENST00000483778 C5orf66Q9H5L9 145 aa13.38□□□□□ -0.27
ATG4B-221ENST00000483778 THYN1Q9P016 225 aa13.38□□□□□ -0.27
ATG4B-221ENST00000483778 IGKV1-39P01597 117 aa13.37□□□□□ -0.27
ATG4B-221ENST00000483778 IGKV1D-39P04432 117 aa13.37□□□□□ -0.27
ATG4B-221ENST00000483778 PRSS3P35030 304 aa13.37□□□□□ -0.27
ATG4B-221ENST00000483778 HRH1P35367 487 aa13.37□□□□□ -0.27
ATG4B-221ENST00000483778 ERVK-16P61578 105 aa13.37□□□□□ -0.27
ATG4B-221ENST00000483778 ANKRD55Q3KP44 614 aa13.37□□□□□ -0.27
ATG4B-221ENST00000483778 GPR31O00270 319 aa13.36□□□□□ -0.27
ATG4B-221ENST00000483778 TMEM127O75204 238 aa13.36□□□□□ -0.27
ATG4B-221ENST00000483778 IGHV3-48P01763 117 aa13.36□□□□□ -0.27
ATG4B-221ENST00000483778 CTSGP08311 255 aa13.36□□□□□ -0.27
ATG4B-221ENST00000483778 ODF3L2Q3SX64 289 aa13.36□□□□□ -0.27
ATG4B-221ENST00000483778 OR6F1Q8NGZ6 308 aa13.36□□□□□ -0.27
ATG4B-221ENST00000483778 GPX8Q8TED1 209 aa13.36□□□□□ -0.27
ATG4B-221ENST00000483778 C20orf24Q9BUV8 137 aa13.36□□□□□ -0.27
ATG4B-221ENST00000483778 C21orf62Q9NYP8 219 aa13.36□□□□□ -0.27
ATG4B-221ENST00000483778 ALMS1Q8TCU4 4167 aa13.36□□□□□ -0.27
ATG4B-221ENST00000483778 A0A0J9YWU9 116 aa13.35□□□□□ -0.27
ATG4B-221ENST00000483778 TSPAN4O14817 238 aa13.35□□□□□ -0.27
ATG4B-221ENST00000483778 SNAPC5O75971 98 aa13.35□□□□□ -0.27
ATG4B-221ENST00000483778 JTBO76095 146 aa13.35□□□□□ -0.27
ATG4B-221ENST00000483778 TAS2R46P59540 309 aa13.35□□□□□ -0.27
ATG4B-221ENST00000483778 IZUMO4Q1ZYL8 232 aa13.35□□□□□ -0.27
ATG4B-221ENST00000483778 CROCCP3Q8IVE0 287 aa13.35□□□□□ -0.27
ATG4B-221ENST00000483778 UBAC2Q8NBM4 344 aa13.35□□□□□ -0.27
ATG4B-221ENST00000483778 LSM10Q969L4 123 aaKnown RBP13.35□□□□□ -0.27
ATG4B-221ENST00000483778 BSCL2Q96G97 398 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-221ENST00000483778 TMEM14BQ9NUH8 114 aa13.35□□□□□ -0.27
ATG4B-221ENST00000483778 COMMD3Q9UBI1 195 aa13.35□□□□□ -0.27
ATG4B-221ENST00000483778 IGHV3-49A0A0A0MS15 119 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms