RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 TSPAN15O95858 294 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 HRASP01112 189 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 COX7A1P24310 79 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 PAX6P26367 422 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 BMI1P35226 326 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 ARF6P62330 175 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 GNB2P62879 340 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 GUCA2BQ16661 112 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 SSX7Q7RTT5 188 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 TAF15Q92804 592 aaKnown RBP eCLIP7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 HARBI1Q96MB7 349 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 TREM1Q9NP99 234 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 HEYLQ9NQ87 328 aaPredicted RBP7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 AKAP9Q99996 3911 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 TEP1Q99973 2627 aaKnown RBP7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 PRSS46E5RG02 174 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 UPK2O00526 184 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 IFNA10P01566 189 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 IGKV1D-33P01593 117 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 IGKV1-33P01594 117 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 IGLV2-23P01705 113 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 IFNA4P05014 189 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 RAB4AP20338 218 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 ZFP36P26651 326 aaKnown RBP7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 HSPE1P61604 102 aaKnown RBP7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 ZNF726P1Q15940 193 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 HLA-DRB5Q30154 266 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 TGIF2LXQ8IUE1 241 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 SCGB1C1Q8TD33 95 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 LHX4Q969G2 390 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 FLYWCH2Q96CP2 140 aaKnown RBP7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 RAB39BQ96DA2 213 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 TIMD4Q96H15 378 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 NEU1Q99519 415 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 RARRES2Q99969 163 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 HINT2Q9BX68 163 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 PATZ1Q9HBE1 687 aaKnown RBP7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 BIN3Q9NQY0 253 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 SIRT7Q9NRC8 400 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 ONECUT1Q9UBC0 465 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 OR51B2Q9Y5P1 312 aa7.15□□□□□ -1.27
CDC42SE1-204ENST00000483763 NAV3Q8IVL0 2385 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 A0A1B0GV90 55 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 NUDT19A8MXV4 375 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 BUB1B-PAK6H3BSN5 160 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 MBP02144 154 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 PF4P02776 101 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 DEFA4P12838 97 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 MDKP21741 143 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 S100PP25815 95 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 TAS2R60P59551 318 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 KRTAP10-9P60411 292 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 DEFA5Q01523 94 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 VWC2Q2TAL6 325 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 TMEM177Q53S58 311 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 AKR1C8PQ5T2L2 129 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 DHRS7BQ6IAN0 325 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 PUSL1Q8N0Z8 303 aaKnown RBP7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 OR10W1Q8NGF6 305 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 OR4P4Q8NGL7 312 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 OR4C13Q8NGP0 309 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 OSR1Q8TAX0 266 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 SFT2D1Q8WV19 159 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 TPSG1Q9NRR2 321 aa7.14□□□□□ -1.27
CDC42SE1-204ENST00000483763 TEX50A0A1B0GTY4 177 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 A0A1B0GW64 132 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 APOA2P02652 100 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 ELLP55199 621 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 MRGPRG-AS1Q2M3A8 158 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 ACSM6Q6P461 480 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 RPP25LQ8N5L8 163 aaKnown RBP7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 NANPQ8TBE9 248 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 NRGNQ92686 78 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 PINX1Q96BK5 328 aaKnown RBP7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 C1orf159Q96HA4 380 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 TMEM147Q9BVK8 224 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 SSBP3Q9BWW4 388 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 CLEC7AQ9BXN2 247 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 HIPK2Q9H2X6 1198 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 BET1LQ9NYM9 111 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 MLXQ9UH92 298 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 CGB1A6NKQ9 187 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 OVOL3O00110 214 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 KBTBD11O94819 623 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 LIPFP07098 398 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 SFTA3P0C7M3 94 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 CNTFRP26992 372 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 EFNA4P52798 201 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 DVL1P1P54792 670 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 GUK1Q16774 197 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 C10orf55Q5SWW7 151 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 C10orf91Q5T1B1 145 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 FAM71F2Q6NXP2 309 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 ETV3LQ6ZN32 361 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 CENPVQ7Z7K6 275 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 PNKDQ8N490 385 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 PSMG3Q9BT73 122 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 NPCDR1Q9BY65 106 aa7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 PARD6GQ9BYG4 376 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE1-204ENST00000483763 ZNF469Q96JG9 3925 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms