RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 LIPFP07098 398 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 OPRK1P41145 380 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 RPL8P62917 257 aaKnown RBP12.78□□□□□ -0.36
RXRA-202ENST00000481739 ICAM4Q14773 271 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 HLA-DRB5Q30154 266 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 FAM74A3Q4VXF1 159 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 ACSM6Q6P461 480 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 RPP25LQ8N5L8 163 aaKnown RBP12.78□□□□□ -0.36
RXRA-202ENST00000481739 OR10G9Q8NGN4 311 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 OR10G7Q8NGN6 311 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 RARRES2Q99969 163 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 CLEC7AQ9BXN2 247 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 COMMD5Q9GZQ3 224 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 NPVFQ9HCQ7 196 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 CENPEQ02224 2701 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 A0A1W2PN81 502 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 IGLV1-47P01700 117 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 SRP19P09132 144 aaKnown RBP12.78□□□□□ -0.36
RXRA-202ENST00000481739 PAX6P26367 422 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 CHRNA7P36544 502 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 GPR6P46095 362 aaPredicted RBP12.78□□□□□ -0.36
RXRA-202ENST00000481739 RAB31Q13636 194 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 HAGHQ16775 308 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 TMEM249Q2WGJ8 235 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 VMA21Q3ZAQ7 101 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 LCN15Q6UWW0 184 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 LY6G5BQ8NDX9 201 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 OR1L8Q8NGR8 309 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 RPS16P62249 146 aaKnown RBP12.77□□□□□ -0.37
RXRA-202ENST00000481739 BSXQ3C1V8 233 aa12.77□□□□□ -0.37
RXRA-202ENST00000481739 C2orf83Q53S99 150 aa12.77□□□□□ -0.37
RXRA-202ENST00000481739 TREML4Q6UXN2 200 aa12.77□□□□□ -0.37
RXRA-202ENST00000481739 TMEM170AQ8WVE7 144 aa12.77□□□□□ -0.37
RXRA-202ENST00000481739 C17orf50Q8WW18 174 aa12.77□□□□□ -0.37
RXRA-202ENST00000481739 SMCO4Q9NRQ5 59 aa12.77□□□□□ -0.37
RXRA-202ENST00000481739 GNG13Q9P2W3 67 aa12.77□□□□□ -0.37
RXRA-202ENST00000481739 VAX2Q9UIW0 290 aa12.77□□□□□ -0.37
RXRA-202ENST00000481739 DOCK11Q5JSL3 2073 aa12.77□□□□□ -0.37
RXRA-202ENST00000481739 TEX50A0A1B0GTY4 177 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 SMCO3A2RU48 225 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 SEC14L6B5MCN3 397 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 MRPL41Q8IXM3 137 aaKnown RBP12.76□□□□□ -0.37
RXRA-202ENST00000481739 PATZ1Q9HBE1 687 aaKnown RBP12.76□□□□□ -0.37
RXRA-202ENST00000481739 LSM4Q9Y4Z0 139 aaKnown RBP12.76□□□□□ -0.37
RXRA-202ENST00000481739 NUPL2O15504 423 aaKnown RBP12.76□□□□□ -0.37
RXRA-202ENST00000481739 CA2P00918 260 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 IGKV1D-33P01593 117 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 IGKV1-33P01594 117 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 IGHV4-39P01824 125 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 OR13C7P0DN81 318 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 REG1BP48304 166 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 ERHP84090 104 aaKnown RBP12.76□□□□□ -0.37
RXRA-202ENST00000481739 TEPPQ6URK8 271 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 Q8N7P7 452 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 RXFP4Q8TDU9 374 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 IGFBPL1Q8WX77 278 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 NRGNQ92686 78 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 MANBALQ9NQG1 85 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 NDUFA4L2Q9NRX3 87 aa12.76□□□□□ -0.37
RXRA-202ENST00000481739 HELZ2Q9BYK8 2649 aaKnown RBP12.76□□□□□ -0.37
RXRA-202ENST00000481739 M0R1W7 72 aa12.75□□□□□ -0.37
RXRA-202ENST00000481739 AWAT1Q58HT5 328 aa12.75□□□□□ -0.37
RXRA-202ENST00000481739 HINT2Q9BX68 163 aa12.75□□□□□ -0.37
RXRA-202ENST00000481739 TUBA4BQ9H853 241 aa12.75□□□□□ -0.37
RXRA-202ENST00000481739 BUB1B-PAK6H3BSN5 160 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 CDC34P49427 236 aaPredicted RBP12.74□□□□□ -0.37
RXRA-202ENST00000481739 TMEM88Q6PEY1 159 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 SSX7Q7RTT5 188 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 TEX45Q8NA69 505 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 RNF5Q99942 180 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 ZFP92A6NM28 416 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 M0R036 132 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 IGLV2-23P01705 113 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 PSMB3P49720 205 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 PDLIM4P50479 330 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 SLC35E3Q7Z769 313 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 CBLN2Q8IUK8 224 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 CACNG8Q8WXS5 425 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 RAB24Q969Q5 203 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 NIPSNAP3BQ9BS92 247 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 SSBP3Q9BWW4 388 aaPredicted RBP12.74□□□□□ -0.37
RXRA-202ENST00000481739 GGTLC1Q9BX51 225 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 SLC25A22Q9H936 323 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 SPG11Q96JI7 2443 aa12.74□□□□□ -0.37
RXRA-202ENST00000481739 DOPEY2Q9Y3R5 2298 aa12.73□□□□□ -0.37
RXRA-202ENST00000481739 C7orf77A4D0Y5 90 aa12.73□□□□□ -0.37
RXRA-202ENST00000481739 ATF4P18848 351 aaPredicted RBP12.73□□□□□ -0.37
RXRA-202ENST00000481739 MAS1LP35410 378 aa12.73□□□□□ -0.37
RXRA-202ENST00000481739 RPL29P47914 159 aaKnown RBP12.73□□□□□ -0.37
RXRA-202ENST00000481739 SUB1P53999 127 aaKnown RBP eCLIP12.73□□□□□ -0.37
RXRA-202ENST00000481739 ATP5J2P56134 94 aa12.73□□□□□ -0.37
RXRA-202ENST00000481739 DIAPH2-AS1Q14236 149 aa12.73□□□□□ -0.37
RXRA-202ENST00000481739 ARSJQ5FYB0 599 aaPredicted RBP12.73□□□□□ -0.37
RXRA-202ENST00000481739 C1orf122Q6ZSJ8 110 aa12.73□□□□□ -0.37
RXRA-202ENST00000481739 TMEM144Q7Z5S9 345 aa12.73□□□□□ -0.37
RXRA-202ENST00000481739 C15orf54Q8N8G6 183 aa12.73□□□□□ -0.37
RXRA-202ENST00000481739 CYB561D1Q8N8Q1 229 aa12.73□□□□□ -0.37
RXRA-202ENST00000481739 MGST2Q99735 147 aa12.73□□□□□ -0.37
RXRA-202ENST00000481739 RPS10P5Q9NQ39 176 aa12.73□□□□□ -0.37
RXRA-202ENST00000481739 INSIG2Q9Y5U4 225 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms