RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 A8MWP6 167 aa13.93□□□□□ -0.18
CLK1-211ENST00000481641 SCAF4O95104 1147 aaKnown RBP13.93□□□□□ -0.18
CLK1-211ENST00000481641 EIF4EP06730 217 aaKnown RBP13.93□□□□□ -0.18
CLK1-211ENST00000481641 NAT1P18440 290 aa13.93□□□□□ -0.18
CLK1-211ENST00000481641 BTNL8Q6UX41 500 aa13.93□□□□□ -0.18
CLK1-211ENST00000481641 LYSMD2Q8IV50 215 aa13.93□□□□□ -0.18
CLK1-211ENST00000481641 TSPAN14Q8NG11 270 aa13.93□□□□□ -0.18
CLK1-211ENST00000481641 OR5H2Q8NGV7 314 aa13.93□□□□□ -0.18
CLK1-211ENST00000481641 FCAMRQ8WWV6 532 aa13.93□□□□□ -0.18
CLK1-211ENST00000481641 HINT2Q9BX68 163 aa13.93□□□□□ -0.18
CLK1-211ENST00000481641 COMMD9Q9P000 198 aa13.93□□□□□ -0.18
CLK1-211ENST00000481641 A0A087WXM4 84 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 IGHV3-21A0A0B4J1V1 117 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 LCE6AA0A183 80 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 MARCH11A6NNE9 402 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 TRAPPC2P0DI81 140 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 TRAPPC2BP0DI82 140 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 OR13C7P0DN81 318 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 F2RP25116 425 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 HLA-DMAP28067 261 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 PRSS3P35030 304 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 G6PCP35575 357 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 ERVK-16P61578 105 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 WT1-ASQ06250 92 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 ZNF585BQ52M93 769 aa13.92□□□□□ -0.18
CLK1-211ENST00000481641 KRASP01116 189 aa13.91□□□□□ -0.18
CLK1-211ENST00000481641 PTBP1P26599 531 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLK1-211ENST00000481641 HRH1P35367 487 aa13.91□□□□□ -0.18
CLK1-211ENST00000481641 MFAP2P55001 183 aa13.91□□□□□ -0.18
CLK1-211ENST00000481641 TAS2R46P59540 309 aa13.91□□□□□ -0.18
CLK1-211ENST00000481641 SLC25A24Q6NUK1 477 aa13.91□□□□□ -0.18
CLK1-211ENST00000481641 PLET1Q6UQ28 207 aa13.91□□□□□ -0.18
CLK1-211ENST00000481641 GDPD1Q8N9F7 314 aa13.91□□□□□ -0.18
CLK1-211ENST00000481641 SLC25A46Q96AG3 418 aa13.91□□□□□ -0.18
CLK1-211ENST00000481641 DGCR14Q96DF8 476 aaKnown RBP13.91□□□□□ -0.18
CLK1-211ENST00000481641 SRSF8Q9BRL6 282 aaKnown RBP13.91□□□□□ -0.18
CLK1-211ENST00000481641 COMMD3Q9UBI1 195 aa13.91□□□□□ -0.18
CLK1-211ENST00000481641 DNAH1Q9P2D7 4330 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 OR2T8A6NH00 312 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 SERPINE2P07093 398 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 NCS1P62166 190 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 PHLDA2Q53GA4 152 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 OR52B4Q8NGK2 314 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 OR1L8Q8NGR8 309 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 OR6F1Q8NGZ6 308 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 BORCS5Q969J3 196 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 VCX3AQ9NNX9 186 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 NDUFA4L2Q9NRX3 87 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 OR51B2Q9Y5P1 312 aa13.9□□□□□ -0.18
CLK1-211ENST00000481641 GPR31O00270 319 aa13.89□□□□□ -0.19
CLK1-211ENST00000481641 TGOLN2O43493 480 aa13.89□□□□□ -0.19
CLK1-211ENST00000481641 C8orf88P0DMB2 117 aa13.89□□□□□ -0.19
CLK1-211ENST00000481641 VBP1P61758 197 aa13.89□□□□□ -0.19
CLK1-211ENST00000481641 SLC16A13Q7RTY0 426 aa13.89□□□□□ -0.19
CLK1-211ENST00000481641 GPX8Q8TED1 209 aa13.89□□□□□ -0.19
CLK1-211ENST00000481641 THYN1Q9P016 225 aa13.89□□□□□ -0.19
CLK1-211ENST00000481641 DBX1A6NMT0 343 aa13.88□□□□□ -0.19
CLK1-211ENST00000481641 TNFAIP8O95379 198 aa13.88□□□□□ -0.19
CLK1-211ENST00000481641 FGF2P09038 288 aa13.88□□□□□ -0.19
CLK1-211ENST00000481641 SNX29P2Q8IUI4 249 aa13.88□□□□□ -0.19
CLK1-211ENST00000481641 CMTM1Q8IZ96 169 aa13.88□□□□□ -0.19
CLK1-211ENST00000481641 VN1R17PQ8TDU5 208 aa13.88□□□□□ -0.19
CLK1-211ENST00000481641 FUNDC2Q9BWH2 189 aa13.88□□□□□ -0.19
CLK1-211ENST00000481641 ZNF436Q9C0F3 470 aaPredicted RBP13.88□□□□□ -0.19
CLK1-211ENST00000481641 F11RQ9Y624 299 aaKnown RBP13.88□□□□□ -0.19
CLK1-211ENST00000481641 IGHV3OR16-8A0A075B7F1 116 aa13.87□□□□□ -0.19
CLK1-211ENST00000481641 SNAPC5O75971 98 aa13.87□□□□□ -0.19
CLK1-211ENST00000481641 TSPAN5P62079 268 aa13.87□□□□□ -0.19
CLK1-211ENST00000481641 THOC7Q6I9Y2 204 aaKnown RBP13.87□□□□□ -0.19
CLK1-211ENST00000481641 LSM10Q969L4 123 aaKnown RBP13.87□□□□□ -0.19
CLK1-211ENST00000481641 CHRDL1Q9BU40 450 aa13.87□□□□□ -0.19
CLK1-211ENST00000481641 MRPL27Q9P0M9 148 aaKnown RBP13.87□□□□□ -0.19
CLK1-211ENST00000481641 UFC1Q9Y3C8 167 aa13.87□□□□□ -0.19
CLK1-211ENST00000481641 F8W735 103 aaPredicted RBP13.86□□□□□ -0.19
CLK1-211ENST00000481641 HPGDSO60760 199 aa13.86□□□□□ -0.19
CLK1-211ENST00000481641 ELK1P19419 428 aa13.86□□□□□ -0.19
CLK1-211ENST00000481641 RBPMS2Q6ZRY4 209 aaKnown RBP13.86□□□□□ -0.19
CLK1-211ENST00000481641 HSD17B13Q7Z5P4 300 aaPredicted RBP13.86□□□□□ -0.19
CLK1-211ENST00000481641 TBC1D26Q86UD7 250 aa13.86□□□□□ -0.19
CLK1-211ENST00000481641 SCARB1Q8WTV0 552 aa13.86□□□□□ -0.19
CLK1-211ENST00000481641 TMEM190Q8WZ59 177 aa13.86□□□□□ -0.19
CLK1-211ENST00000481641 MARC2Q969Z3 335 aa13.86□□□□□ -0.19
CLK1-211ENST00000481641 SMIM31A0A1B0GVY4 71 aa13.85□□□□□ -0.19
CLK1-211ENST00000481641 K7EIM0 57 aa13.85□□□□□ -0.19
CLK1-211ENST00000481641 CYB5BO43169 146 aa13.85□□□□□ -0.19
CLK1-211ENST00000481641 ZNF207O43670 478 aaKnown RBP13.85□□□□□ -0.19
CLK1-211ENST00000481641 APOA1P02647 267 aa13.85□□□□□ -0.19
CLK1-211ENST00000481641 ELLP55199 621 aaPredicted RBP13.85□□□□□ -0.19
CLK1-211ENST00000481641 RNASE12Q5GAN4 147 aaKnown RBP13.85□□□□□ -0.19
CLK1-211ENST00000481641 UBAC2Q8NBM4 344 aa13.85□□□□□ -0.19
CLK1-211ENST00000481641 OR1L6Q8NGR2 347 aa13.85□□□□□ -0.19
CLK1-211ENST00000481641 C21orf62Q9NYP8 219 aa13.85□□□□□ -0.19
CLK1-211ENST00000481641 UBQLN2Q9UHD9 624 aa13.85□□□□□ -0.19
CLK1-211ENST00000481641 PRNDQ9UKY0 176 aa13.85□□□□□ -0.19
CLK1-211ENST00000481641 TRAV25A0A0B4J276 109 aa13.84□□□□□ -0.19
CLK1-211ENST00000481641 M0QYG6 137 aa13.84□□□□□ -0.19
CLK1-211ENST00000481641 IGKV1-39P01597 117 aa13.84□□□□□ -0.19
CLK1-211ENST00000481641 IGKV1D-39P04432 117 aa13.84□□□□□ -0.19
CLK1-211ENST00000481641 ADMP35318 185 aa13.84□□□□□ -0.19
CLK1-211ENST00000481641 ANKRD55Q3KP44 614 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms