RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 RRHO14718 337 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 RAMP3O60896 148 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 TUSC1Q2TAM9 212 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 CYP2G1PQ6ZSU1 146 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 BEND2Q8NDZ0 799 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 ELOVL1Q9BW60 279 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 HSPB7Q9UBY9 170 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 URGCP-MRPS24S4R325 110 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 TRAV14DV4A0A0A6YYC5 116 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 C8orf88P0DMB2 117 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 ADORA2A-AS1P86434 159 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 Q5BKY6 102 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 MUC6Q6W4X9 2439 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 REG1AP05451 166 aa15.87■□□□□ 0.13
CCM2-214ENST00000481194 IGHV1-3A0A0C4DH29 117 aa15.87■□□□□ 0.13
CCM2-214ENST00000481194 BSCL2Q96G97 398 aaPredicted RBP15.87■□□□□ 0.13
CCM2-214ENST00000481194 ZNF407Q9C0G0 2248 aa15.87■□□□□ 0.13
CCM2-214ENST00000481194 GATCO43716 136 aaKnown RBP15.87■□□□□ 0.13
CCM2-214ENST00000481194 BUB1B-PAK6H3BSN5 160 aa15.87■□□□□ 0.13
CCM2-214ENST00000481194 PSG9Q00887 426 aa15.87■□□□□ 0.13
CCM2-214ENST00000481194 RNF166Q96A37 237 aaPredicted RBP15.87■□□□□ 0.13
CCM2-214ENST00000481194 BPESC1Q9GZL8 116 aa15.87■□□□□ 0.13
CCM2-214ENST00000481194 PHF3Q92576 2039 aaKnown RBP15.87■□□□□ 0.13
CCM2-214ENST00000481194 ZNF439Q8NDP4 499 aa15.87■□□□□ 0.13
CCM2-214ENST00000481194 UQCRFS1P47985 274 aa15.86■□□□□ 0.13
CCM2-214ENST00000481194 NDUFA6P56556 154 aa15.86■□□□□ 0.13
CCM2-214ENST00000481194 SUPT4H1P63272 117 aaKnown RBP15.86■□□□□ 0.13
CCM2-214ENST00000481194 NPIPB3Q92617 1050 aa15.86■□□□□ 0.13
CCM2-214ENST00000481194 CTDSP1Q9GZU7 261 aa15.86■□□□□ 0.13
CCM2-214ENST00000481194 HSPB1P04792 205 aaKnown RBP15.86■□□□□ 0.13
CCM2-214ENST00000481194 NMBP08949 121 aa15.86■□□□□ 0.13
CCM2-214ENST00000481194 RPL7P18124 248 aaKnown RBP15.86■□□□□ 0.13
CCM2-214ENST00000481194 TPPP2P59282 170 aa15.86■□□□□ 0.13
CCM2-214ENST00000481194 CENPVQ7Z7K6 275 aaPredicted RBP15.86■□□□□ 0.13
CCM2-214ENST00000481194 KIR3DL3Q8N743 410 aa15.86■□□□□ 0.13
CCM2-214ENST00000481194 MOB4Q9Y3A3 225 aa15.86■□□□□ 0.13
CCM2-214ENST00000481194 TRAV40A0A0B4J280 105 aa15.86■□□□□ 0.13
CCM2-214ENST00000481194 BSXQ3C1V8 233 aa15.86■□□□□ 0.13
CCM2-214ENST00000481194 NPCDR1Q9BY65 106 aa15.86■□□□□ 0.13
CCM2-214ENST00000481194 PAX5Q02548 391 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 DAZAP2Q15038 168 aaPredicted RBP15.85■□□□□ 0.13
CCM2-214ENST00000481194 SRSF12Q8WXF0 261 aaKnown RBP15.85■□□□□ 0.13
CCM2-214ENST00000481194 PRSS22Q9GZN4 317 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 TRGV3P03979 118 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 DEFA6Q01524 100 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 ZNF525Q8N782 197 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 OR51G1Q8NGK1 321 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 RPEL1Q2QD12 228 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 COX19Q49B96 90 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 OR5AU1Q8NGC0 362 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 ZNF581Q9P0T4 197 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 HELTA6NFD8 242 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 CTRB1P17538 263 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 CTRB2Q6GPI1 263 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 TMEM167AQ8TBQ9 72 aa15.85■□□□□ 0.13
CCM2-214ENST00000481194 SPTBN2O15020 2390 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 H0YJW9 148 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 KIAA0141Q14154 515 aaPredicted RBP15.84■□□□□ 0.13
CCM2-214ENST00000481194 HERPUD1Q15011 391 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 NECAP1Q8NC96 275 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 HS3ST6Q96QI5 342 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 NABP2Q9BQ15 211 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 FBXL7Q9UJT9 491 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 MPTX1A8MV57 137 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 NPFFO15130 113 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 FAM157CP0CG43 387 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 RNF222A6NCQ9 220 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 WNT2P09544 360 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 SPOCK3Q9BQ16 436 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 RNF126Q9BV68 326 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 SRSF4Q08170 494 aaKnown RBP15.84■□□□□ 0.13
CCM2-214ENST00000481194 BEX4Q9NWD9 120 aaPredicted RBP15.84■□□□□ 0.13
CCM2-214ENST00000481194 C21orf62Q9NYP8 219 aa15.84■□□□□ 0.13
CCM2-214ENST00000481194 OR9G9P0C7N8 305 aa15.83■□□□□ 0.13
CCM2-214ENST00000481194 LINC00311Q8N616 119 aa15.83■□□□□ 0.13
CCM2-214ENST00000481194 IL6RP08887 468 aaPredicted RBP15.83■□□□□ 0.12
CCM2-214ENST00000481194 S100A4P26447 101 aaKnown RBP15.83■□□□□ 0.12
CCM2-214ENST00000481194 NMSQ5H8A3 153 aa15.83■□□□□ 0.12
CCM2-214ENST00000481194 GVINP1Q7Z2Y8 2422 aa15.83■□□□□ 0.12
CCM2-214ENST00000481194 SH2D7A6NKC9 451 aaPredicted RBP15.83■□□□□ 0.12
CCM2-214ENST00000481194 LAMTOR1Q6IAA8 161 aa15.83■□□□□ 0.12
CCM2-214ENST00000481194 ZFHX2Q9C0A1 2572 aaPredicted RBP15.82■□□□□ 0.12
CCM2-214ENST00000481194 DLX6P56179 175 aa15.82■□□□□ 0.12
CCM2-214ENST00000481194 TMEM144Q7Z5S9 345 aa15.82■□□□□ 0.12
CCM2-214ENST00000481194 MSGN1A6NI15 193 aa15.82■□□□□ 0.12
CCM2-214ENST00000481194 DBX1A6NMT0 343 aa15.82■□□□□ 0.12
CCM2-214ENST00000481194 RAB24Q969Q5 203 aa15.82■□□□□ 0.12
CCM2-214ENST00000481194 OR2J3O76001 311 aa15.82■□□□□ 0.12
CCM2-214ENST00000481194 PRSS8Q16651 343 aa15.82■□□□□ 0.12
CCM2-214ENST00000481194 MS4A10Q96PG2 267 aa15.82■□□□□ 0.12
CCM2-214ENST00000481194 SRSF8Q9BRL6 282 aaKnown RBP15.82■□□□□ 0.12
CCM2-214ENST00000481194 WNT10AQ9GZT5 417 aa15.82■□□□□ 0.12
CCM2-214ENST00000481194 OR51M1Q9H341 326 aa15.82■□□□□ 0.12
CCM2-214ENST00000481194 TEX50A0A1B0GTY4 177 aa15.81■□□□□ 0.12
CCM2-214ENST00000481194 G3V3Q6 166 aa15.81■□□□□ 0.12
CCM2-214ENST00000481194 SSTP61278 116 aa15.81■□□□□ 0.12
CCM2-214ENST00000481194 ITLN2Q8WWU7 325 aaPredicted RBP15.81■□□□□ 0.12
CCM2-214ENST00000481194 A0A1W2PPQ1 181 aa15.81■□□□□ 0.12
CCM2-214ENST00000481194 NPPCP23582 126 aa15.81■□□□□ 0.12
CCM2-214ENST00000481194 RPL30P62888 115 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms