RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 FYTTD1Q96QD9 318 aaKnown RBP9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 PHB2Q99623 299 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 CITED1Q99966 193 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 QTRT1Q9BXR0 403 aaKnown RBP9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 COA4Q9NYJ1 87 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 CACNG5Q9UF02 275 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 A0A1W2PN81 502 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 HMX3A6NHT5 357 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 SNRPGP15A8MWD9 76 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 ST8SIA3O43173 380 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 SOX15O60248 233 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 RBMXL2O75526 392 aaKnown RBP9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 BRI3O95415 125 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 DHFRP00374 187 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 SULT1A3P0DMM9 295 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 SULT1A4P0DMN0 295 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 PSMB8P28062 276 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 CHRNA7P36544 502 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 CD83Q01151 205 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 SRSF4Q08170 494 aaKnown RBP9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 FOXE3Q13461 319 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 RGS21Q2M5E4 152 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 TCTEX1D4Q5JR98 221 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 GGNBP1Q5YKI7 109 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 TTC9CQ8N5M4 171 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 OR5M8Q8NGP6 311 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 OR52E5Q8NH55 327 aa9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 FAM110DQ8TAY7 271 aaPredicted RBP9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 GPN1Q9HCN4 374 aaPredicted RBP9.68□□□□□ -0.86
SHROOM3-205ENST00000481002 IGLC7A0M8Q6 106 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 NPIPB5A8MRT5 1133 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 H3BUA1 57 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 PITX3O75364 302 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 FBXO24O75426 580 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 ADAP1O75689 374 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 CRYGCP07315 174 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 HOXB5P09067 269 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 APELAP0DMC3 54 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 CD28P10747 220 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 PRCDQ00LT1 54 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 SMCO1Q147U7 214 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 PDLIM3Q53GG5 364 aaPredicted RBP9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 SHISA2Q6UWI4 295 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 HSD17B13Q7Z5P4 300 aaPredicted RBP9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 C12orf45Q8N5I9 185 aaPredicted RBP9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 OR5T1Q8NG75 326 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 OR10W1Q8NGF6 305 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 OR4X2Q8NGF9 303 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 SPATA3Q8NHX4 192 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 CACFD1Q9UGQ2 172 aa9.67□□□□□ -0.86
SHROOM3-205ENST00000481002 INS-IGF2F8WCM5 200 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 IFNA21P01568 189 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 IFNA17P01571 189 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 AREGP15514 252 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 CTRB1P17538 263 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 PSMB6P28072 239 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 RAB9AP51151 201 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 SPCS3P61009 180 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 OXA1LQ15070 435 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 KLK9Q2XQG4 91 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 CXorf66Q5JRM2 361 aaPredicted RBP9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 CTRB2Q6GPI1 263 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 MYOZ3Q8TDC0 251 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 HINT2Q9BX68 163 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 KLK15Q9H2R5 256 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 KLK9Q9UKQ9 250 aa9.66□□□□□ -0.86
SHROOM3-205ENST00000481002 TCRBV4S1A1TA0A5B7 111 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 C7orf66A4D0T2 115 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 OR13C7P0DN81 318 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 PF4V1P10720 104 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 WT1-ASQ06250 92 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 KIAA0141Q14154 515 aaPredicted RBP9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 TMEM65Q6PI78 240 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 LCNL1Q6ZST4 164 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 C11orf44Q8N8P7 122 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 CITED2Q99967 270 aaPredicted RBP9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 PDCD10Q9BUL8 212 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 SLA2Q9H6Q3 261 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 ZFP57Q9NU63 452 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 HSPB7Q9UBY9 170 aa9.65□□□□□ -0.86
SHROOM3-205ENST00000481002 TRBV9A0A0B4J1U6 114 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 MPTX1A8MV57 137 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 FAM90A26D6RGX4 464 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 RPLP1P05386 114 aaKnown RBP9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 TNFRSF9Q07011 255 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 TATDN3Q17R31 274 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 NDUFA11Q86Y39 141 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 MRPL41Q8IXM3 137 aaKnown RBP9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 OR2C3Q8N628 320 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 ZNF491Q8N8L2 437 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 UXS1Q8NBZ7 420 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 OR1S1Q8NH92 325 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 FANCD2OSQ96PS1 177 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 PLEKHA3Q9HB20 300 aa9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 TSSC4Q9Y5U2 329 aaPredicted RBP9.64□□□□□ -0.87
SHROOM3-205ENST00000481002 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
SHROOM3-205ENST00000481002 TRGV3P03979 118 aa9.63□□□□□ -0.87
SHROOM3-205ENST00000481002 REG1AP05451 166 aa9.63□□□□□ -0.87
SHROOM3-205ENST00000481002 CDX1P47902 265 aaPredicted RBP9.63□□□□□ -0.87
SHROOM3-205ENST00000481002 RPL23AP62750 156 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms