RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 AK3Q9UIJ7 227 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 LAMB2P55268 1798 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 CACNA1IQ9P0X4 2223 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 COL4A1P02462 1669 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 RGPD3A6NKT7 1758 aaPredicted RBP5.82□□□□□ -1.48
LSM5-210ENST00000480956 RGPD4Q7Z3J3 1758 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 CDS2O95674 445 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 LTAP01374 205 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 SEC11BP0C7V7 166 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 ZNF806P0C7X5 589 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 SMIM6P0DI80 62 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 CMPK1P30085 196 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 CXCL5P42830 114 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 Q6Q795 121 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 Q6ZS49 121 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 Q8N377 158 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 SLC22A24Q8N4F4 322 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 NUP35Q8NFH5 326 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 PDXPQ96GD0 296 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 FBXL12Q9NXK8 326 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 RPUSD1Q9UJJ7 312 aaKnown RBP5.82□□□□□ -1.48
LSM5-210ENST00000480956 CHD5Q8TDI0 1954 aa5.82□□□□□ -1.48
LSM5-210ENST00000480956 RAI1Q7Z5J4 1906 aaPredicted RBP5.82□□□□□ -1.48
LSM5-210ENST00000480956 DOCK5Q9H7D0 1870 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 IGHV1OR15-9A0A0B4J2B8 117 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 POP7O75817 140 aaKnown RBP5.81□□□□□ -1.48
LSM5-210ENST00000480956 IGHV3-11P01762 117 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 NPY1RP25929 384 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 NMUP48645 174 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 LOXL1Q08397 574 aaPredicted RBP5.81□□□□□ -1.48
LSM5-210ENST00000480956 C20orf203Q8NBC4 194 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 RTN4IP1Q8WWV3 396 aaPredicted RBP5.81□□□□□ -1.48
LSM5-210ENST00000480956 SLC7A6Q92536 515 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 DERL3Q96Q80 235 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 LITAFQ99732 161 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 OR2D2Q9H210 308 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 CACYBPQ9HB71 228 aaKnown RBP5.81□□□□□ -1.48
LSM5-210ENST00000480956 ZNF492Q9P255 531 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 NUFIP1Q9UHK0 495 aaKnown RBP5.81□□□□□ -1.48
LSM5-210ENST00000480956 COL24A1Q17RW2 1714 aa5.81□□□□□ -1.48
LSM5-210ENST00000480956 SCN10AQ9Y5Y9 1956 aa5.8□□□□□ -1.48
LSM5-210ENST00000480956 DUXBA0A1W2PPF3 345 aa5.8□□□□□ -1.48
LSM5-210ENST00000480956 HSPB1P04792 205 aaKnown RBP5.8□□□□□ -1.48
LSM5-210ENST00000480956 SMIM10L2AP0DMW4 78 aa5.8□□□□□ -1.48
LSM5-210ENST00000480956 SMIM10L2BP0DMW5 78 aa5.8□□□□□ -1.48
LSM5-210ENST00000480956 ZNF25P17030 456 aaPredicted RBP5.8□□□□□ -1.48
LSM5-210ENST00000480956 EMX2Q04743 252 aa5.8□□□□□ -1.48
LSM5-210ENST00000480956 DHRS2Q13268 280 aa5.8□□□□□ -1.48
LSM5-210ENST00000480956 GLT8D1Q68CQ7 371 aa5.8□□□□□ -1.48
LSM5-210ENST00000480956 LAIR2Q6ISS4 152 aa5.8□□□□□ -1.48
LSM5-210ENST00000480956 OR4K5Q8NGD3 323 aa5.8□□□□□ -1.48
LSM5-210ENST00000480956 ACOT12Q8WYK0 555 aa5.8□□□□□ -1.48
LSM5-210ENST00000480956 ERMAPQ96PL5 475 aaPredicted RBP5.8□□□□□ -1.48
LSM5-210ENST00000480956 CARMIL3Q8ND23 1372 aa5.8□□□□□ -1.48
LSM5-210ENST00000480956 MEIKINA0A087WXM9 373 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 K7ERU9 68 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 LST1O00453 97 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 TXNDC9O14530 226 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 COX7A2LO14548 114 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 TNFSF15O95150 251 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 IGLV2-11P01706 119 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 GABRA2P47869 451 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 DAPP51397 102 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 KLF3P57682 345 aaPredicted RBP5.79□□□□□ -1.48
LSM5-210ENST00000480956 TMEM229BQ8NBD8 167 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 C15orf40Q8WUR7 153 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 C11orf68Q9H3H3 251 aaKnown RBP5.79□□□□□ -1.48
LSM5-210ENST00000480956 LAMTOR2Q9Y2Q5 125 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 A0A0J9YY10 115 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 A0A1B0GX78 115 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 A8MUN3 132 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 IGF2P01344 180 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 PSG9Q00887 426 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 ATP5G2Q06055 141 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 MORN2Q502X0 79 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 IL34Q6ZMJ4 242 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 ZNF721Q8TF20 911 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 ZNF778Q96MU6 729 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 OR2M2Q96R28 347 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 TMEM38BQ9NVV0 291 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 TRAPPC2LQ9UL33 140 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 CHD4Q14839 1912 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 ANKRD31Q8N7Z5 1873 aa5.79□□□□□ -1.48
LSM5-210ENST00000480956 MED23Q9ULK4 1368 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 IGLV1-50A0A075B6I6 118 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 IGHV3-72A0A0B4J1Y9 119 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 IGHV3-66A0A0C4DH42 116 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 TMEM269A0A1B0GVZ9 245 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 J3QRK9 145 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 MAS1P04201 325 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 RBMXP38159 391 aaKnown RBP5.78□□□□□ -1.48
LSM5-210ENST00000480956 OPRK1P41145 380 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 UBE2AP49459 152 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 NEDD8Q15843 81 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 ZNF613Q6PF04 617 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 WDR59Q6PJI9 974 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 ZNF525Q8N782 197 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 ZNF283Q8N7M2 679 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 SLC30A7Q8NEW0 376 aa5.78□□□□□ -1.48
LSM5-210ENST00000480956 MRPL30Q8TCC3 161 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms