RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 RTN4RL2Q86UN3 420 aa11.52□□□□□ -0.56
MCF2L-225ENST00000480321 FDCSPQ8NFU4 85 aa11.52□□□□□ -0.56
MCF2L-225ENST00000480321 IGLV3-19P01714 112 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 NPPCP23582 126 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 MEF2CQ06413 473 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-225ENST00000480321 TIMM23BQ5SRD1 257 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 GDF15Q99988 308 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 TBL2Q9Y4P3 447 aaKnown RBP11.52□□□□□ -0.57
MCF2L-225ENST00000480321 OR11H12B2RN74 326 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 B9A039 149 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 CACNG7P62955 275 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 OR11H1Q8NG94 326 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 OR11H2Q8NH07 326 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 NBEAP1P0C6P0 100 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 PNKDQ8N490 385 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 SLC25A28Q96A46 364 aa11.52□□□□□ -0.57
MCF2L-225ENST00000480321 RPP21Q9H633 154 aaKnown RBP11.52□□□□□ -0.57
MCF2L-225ENST00000480321 ZNF703Q9H7S9 590 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-225ENST00000480321 ZNF815PA8K554 130 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 RRHO14718 337 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 FOXH1O75593 365 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 SRSF7Q16629 238 aaKnown RBP eCLIP11.51□□□□□ -0.57
MCF2L-225ENST00000480321 TRBV6-7A0A0A0MS04 114 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 FAM90A9PA6NNJ1 464 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 TIAF1O95411 115 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 REG1AP05451 166 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 PPP1R32Q7Z5V6 425 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 FAM89BQ8N5H3 189 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 IMMP2LQ96T52 175 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 UNC13CQ8NB66 2214 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 BEX4Q9NWD9 120 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-225ENST00000480321 A0A1B0GUT8 65 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 CSRP2Q16527 193 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 LY6G6FQ5SQ64 297 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 CIARTQ8N365 385 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-225ENST00000480321 TAF1LQ8IZX4 1826 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 IGKV3-20P01619 116 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 GPX1P07203 203 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 HTN3P15516 51 aa11.51□□□□□ -0.57
MCF2L-225ENST00000480321 FOXD3Q9UJU5 478 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-225ENST00000480321 ICAM4Q14773 271 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 C10orf126Q8N4M7 172 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 PRELID3AQ96N28 172 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 TMEM242Q9NWH2 141 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 LYPD3O95274 346 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 STAG3L3P0CL85 134 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 MEIG1Q5JSS6 88 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 NR2C2APQ86WQ0 139 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 TRBV20OR9-2A0A075B6H5 130 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 IGLV3-32A0A0A0MS00 114 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 UBE2CO00762 179 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 VKORC1L1Q8N0U8 176 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 TTC9CQ8N5M4 171 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 OR13C6PQ8NH95 151 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 TNS1Q9HBL0 1735 aaKnown RBP11.5□□□□□ -0.57
MCF2L-225ENST00000480321 IQCF6A8MYZ5 107 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 CGAP01215 116 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 RPL23P62829 140 aaKnown RBP11.5□□□□□ -0.57
MCF2L-225ENST00000480321 TFF3Q07654 80 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 KLK15Q9H2R5 256 aa11.5□□□□□ -0.57
MCF2L-225ENST00000480321 POLR2AP24928 1970 aaKnown RBP11.5□□□□□ -0.57
MCF2L-225ENST00000480321 IGKV1D-43A0A0B4J1Z2 117 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 A0A1B0GW64 132 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 RSPO4Q2I0M5 234 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-225ENST00000480321 MBNL2Q5VZF2 373 aaKnown RBP11.49□□□□□ -0.57
MCF2L-225ENST00000480321 SSBP3Q9BWW4 388 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-225ENST00000480321 AICDAQ9GZX7 198 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 C1QTNF9BB2RNN3 333 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 APOBEC3AP31941 199 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-225ENST00000480321 NEUROG3Q9Y4Z2 214 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 KBTBD11-OT1A0A1B0GTJ5 212 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 SCO2A0A1W2PP80 73 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 H7C1H1 209 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 LINC00469Q8N7U9 141 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 CCL20P78556 96 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 ACSF3Q4G176 576 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-225ENST00000480321 TEX45Q8NA69 505 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 NDUFAF3Q9BU61 184 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 PATJQ8NI35 1801 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 ZNF883P0CG24 379 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 RPL39P5Q59GN2 51 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 ATRAIDQ6UW56 229 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 PRDM13Q9H4Q3 707 aa11.49□□□□□ -0.57
MCF2L-225ENST00000480321 CCDC88CQ9P219 2028 aa11.48□□□□□ -0.57
MCF2L-225ENST00000480321 IGFBP2P18065 325 aa11.48□□□□□ -0.57
MCF2L-225ENST00000480321 FAM74A4Q5TZK3 123 aa11.48□□□□□ -0.57
MCF2L-225ENST00000480321 SAMD13Q5VXD3 122 aa11.48□□□□□ -0.57
MCF2L-225ENST00000480321 TMEM144Q7Z5S9 345 aa11.48□□□□□ -0.57
MCF2L-225ENST00000480321 WNK3Q9BYP7 1800 aa11.48□□□□□ -0.57
MCF2L-225ENST00000480321 ZNF324BQ6AW86 544 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-225ENST00000480321 LDLRAD4O15165 306 aa11.48□□□□□ -0.57
MCF2L-225ENST00000480321 ZIC3O60481 467 aa11.48□□□□□ -0.57
MCF2L-225ENST00000480321 ZNF418Q8TF45 676 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-225ENST00000480321 OSTCQ9NRP0 149 aa11.48□□□□□ -0.57
MCF2L-225ENST00000480321 PSMB11A5LHX3 300 aa11.48□□□□□ -0.57
MCF2L-225ENST00000480321 SNRPD3P62318 126 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms