RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 NDUFAF3Q9BU61 184 aa12.5□□□□□ -0.41
HMGN1-212ENST00000479586 HRASLSQ9HDD0 168 aa12.5□□□□□ -0.41
HMGN1-212ENST00000479586 BET1LQ9NYM9 111 aa12.5□□□□□ -0.41
HMGN1-212ENST00000479586 C21orf62Q9NYP8 219 aa12.5□□□□□ -0.41
HMGN1-212ENST00000479586 TAS2R8Q9NYW2 309 aa12.5□□□□□ -0.41
HMGN1-212ENST00000479586 OR2W1Q9Y3N9 320 aa12.5□□□□□ -0.41
HMGN1-212ENST00000479586 X6R8D5 127 aa12.5□□□□□ -0.41
HMGN1-212ENST00000479586 IGHV3OR16-13A0A075B7E8 117 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 IGHV3-74A0A0B4J1X5 117 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 TRAV3A0A0B4J244 114 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 HIST1H1DP16402 221 aaKnown RBP12.49□□□□□ -0.41
HMGN1-212ENST00000479586 DEFB131AP59861 70 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 C12orf74Q32Q52 190 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 LAIR2Q6ISS4 152 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 Q6ZS49 121 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 MFSD4AQ8N468 514 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 GDPD1Q8N9F7 314 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 UBAC2Q8NBM4 344 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 CYGBQ8WWM9 190 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 PSORS1C1Q9UIG5 152 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 DNAH5Q8TE73 4624 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 AGRNO00468 2067 aa12.49□□□□□ -0.41
HMGN1-212ENST00000479586 SLC22A5O76082 557 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 TALDO1P37837 337 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 SOHLH1Q5JUK2 328 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 SLC25A24Q6NUK1 477 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 Q6ZRM9 215 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 Q8N1X5 172 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 FAM24BQ8N5W8 94 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 OR10R2Q8NGX6 335 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 SCARB1Q8WTV0 552 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 TMEM203Q969S6 136 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 CMTM3Q96MX0 182 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 ELF5Q9UKW6 265 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-212ENST00000479586 RAB22AQ9UL26 194 aa12.48□□□□□ -0.41
HMGN1-212ENST00000479586 DMBT1Q9UGM3 2413 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-212ENST00000479586 ZNF705EA8MWA4 302 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-212ENST00000479586 ATP5HO75947 161 aa12.47□□□□□ -0.41
HMGN1-212ENST00000479586 IFNA10P01566 189 aa12.47□□□□□ -0.41
HMGN1-212ENST00000479586 C4BPBP20851 252 aa12.47□□□□□ -0.41
HMGN1-212ENST00000479586 WT1-ASQ06250 92 aa12.47□□□□□ -0.41
HMGN1-212ENST00000479586 SSX1Q16384 188 aa12.47□□□□□ -0.41
HMGN1-212ENST00000479586 Q56UQ5 140 aa12.47□□□□□ -0.41
HMGN1-212ENST00000479586 STHQ8IWL8 128 aa12.47□□□□□ -0.41
HMGN1-212ENST00000479586 GIMAP1Q8WWP7 306 aa12.47□□□□□ -0.41
HMGN1-212ENST00000479586 SRSF8Q9BRL6 282 aaKnown RBP12.47□□□□□ -0.41
HMGN1-212ENST00000479586 CENPOQ9BU64 300 aa12.47□□□□□ -0.41
HMGN1-212ENST00000479586 QTRT1Q9BXR0 403 aaKnown RBP12.47□□□□□ -0.41
HMGN1-212ENST00000479586 COMMD5Q9GZQ3 224 aa12.47□□□□□ -0.41
HMGN1-212ENST00000479586 UPK2O00526 184 aa12.46□□□□□ -0.41
HMGN1-212ENST00000479586 CYB5BO43169 146 aa12.46□□□□□ -0.41
HMGN1-212ENST00000479586 CD74P04233 296 aa12.46□□□□□ -0.41
HMGN1-212ENST00000479586 OR13C7P0DN81 318 aa12.46□□□□□ -0.41
HMGN1-212ENST00000479586 GADD45AP24522 165 aa12.46□□□□□ -0.41
HMGN1-212ENST00000479586 HES5Q5TA89 166 aa12.46□□□□□ -0.41
HMGN1-212ENST00000479586 TMEM91Q6ZNR0 172 aa12.46□□□□□ -0.41
HMGN1-212ENST00000479586 TCF24Q7RTU0 167 aa12.46□□□□□ -0.41
HMGN1-212ENST00000479586 UBE2DNLQ8IWF7 75 aa12.46□□□□□ -0.41
HMGN1-212ENST00000479586 OR10C1Q96KK4 312 aa12.46□□□□□ -0.41
HMGN1-212ENST00000479586 ATP6V0BQ99437 205 aa12.46□□□□□ -0.41
HMGN1-212ENST00000479586 K7EIM0 57 aa12.45□□□□□ -0.42
HMGN1-212ENST00000479586 NUPL2O15504 423 aaKnown RBP12.45□□□□□ -0.42
HMGN1-212ENST00000479586 TNFSF12O43508 249 aa12.45□□□□□ -0.42
HMGN1-212ENST00000479586 YIF1AO95070 293 aa12.45□□□□□ -0.42
HMGN1-212ENST00000479586 SERPINE2P07093 398 aa12.45□□□□□ -0.42
HMGN1-212ENST00000479586 CTSGP08311 255 aa12.45□□□□□ -0.42
HMGN1-212ENST00000479586 PAFAH1B2P68402 229 aa12.45□□□□□ -0.42
HMGN1-212ENST00000479586 C1orf134Q5TEV5 83 aa12.45□□□□□ -0.42
HMGN1-212ENST00000479586 ZNF66Q6ZN08 573 aa12.45□□□□□ -0.42
HMGN1-212ENST00000479586 TRPT1Q86TN4 253 aaKnown RBP12.45□□□□□ -0.42
HMGN1-212ENST00000479586 PQLC1Q8N2U9 271 aa12.45□□□□□ -0.42
HMGN1-212ENST00000479586 MS4A6AQ9H2W1 248 aa12.45□□□□□ -0.42
HMGN1-212ENST00000479586 CLEC5AQ9NY25 188 aa12.45□□□□□ -0.42
HMGN1-212ENST00000479586 DFFBO76075 338 aa12.44□□□□□ -0.42
HMGN1-212ENST00000479586 IFNA21P01568 189 aa12.44□□□□□ -0.42
HMGN1-212ENST00000479586 IFNA17P01571 189 aa12.44□□□□□ -0.42
HMGN1-212ENST00000479586 LIPKQ5VXJ0 399 aa12.44□□□□□ -0.42
HMGN1-212ENST00000479586 SPAG16Q8N0X2 631 aa12.44□□□□□ -0.42
HMGN1-212ENST00000479586 MND1Q9BWT6 205 aa12.44□□□□□ -0.42
HMGN1-212ENST00000479586 SCRT2Q9NQ03 307 aa12.44□□□□□ -0.42
HMGN1-212ENST00000479586 LSM2Q9Y333 95 aaKnown RBP12.44□□□□□ -0.42
HMGN1-212ENST00000479586 F11RQ9Y624 299 aaKnown RBP12.44□□□□□ -0.42
HMGN1-212ENST00000479586 TRAV14DV4A0A0A6YYC5 116 aa12.43□□□□□ -0.42
HMGN1-212ENST00000479586 DNASE2O00115 360 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-212ENST00000479586 DTYMKP23919 212 aa12.43□□□□□ -0.42
HMGN1-212ENST00000479586 RPS25P62851 125 aaKnown RBP12.43□□□□□ -0.42
HMGN1-212ENST00000479586 RELQ04864 619 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-212ENST00000479586 TNP2Q05952 138 aa12.43□□□□□ -0.42
HMGN1-212ENST00000479586 TMEM41BQ5BJD5 291 aa12.43□□□□□ -0.42
HMGN1-212ENST00000479586 LILRB2Q8N423 598 aa12.43□□□□□ -0.42
HMGN1-212ENST00000479586 BPIFB6Q8NFQ5 453 aa12.43□□□□□ -0.42
HMGN1-212ENST00000479586 ST8SIA2Q92186 375 aa12.43□□□□□ -0.42
HMGN1-212ENST00000479586 DGCR14Q96DF8 476 aaKnown RBP12.43□□□□□ -0.42
HMGN1-212ENST00000479586 TMEM140Q9NV12 185 aa12.43□□□□□ -0.42
HMGN1-212ENST00000479586 FKBP14Q9NWM8 211 aa12.43□□□□□ -0.42
HMGN1-212ENST00000479586 TBC1D24Q9ULP9 559 aa12.43□□□□□ -0.42
HMGN1-212ENST00000479586 V9GY05 133 aa12.43□□□□□ -0.42
HMGN1-212ENST00000479586 GNAO1P09471 354 aa12.42□□□□□ -0.42
HMGN1-212ENST00000479586 CTXN2P0C2S0 81 aa12.42□□□□□ -0.42
HMGN1-212ENST00000479586 TRAPPC2P0DI81 140 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms