RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TMEM178AQ8NBL3 297 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 V9GYV3 84 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 DIRC3C9JPN6 131 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 SIAH2O43255 324 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 TCF21O43680 179 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 RAB7AP51149 207 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 TCL1AP56279 114 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 EFNB3Q15768 340 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 MSMPQ1L6U9 139 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 UTF1Q5T230 341 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 Q6ZT83 130 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 MRPL52Q86TS9 123 aaKnown RBP10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 DOLPP1Q86YN1 238 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 C11orf42Q8N5U0 333 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 SIGLECL1Q8N7X8 197 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 EAF1Q96JC9 268 aaPredicted RBP10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 RNASE7Q9H1E1 156 aaKnown RBP10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 NCOR1P1Q9H4R4 102 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 AKAP13Q12802 2813 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 KALRNO60229 2985 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 GFRA3O60609 400 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 CGAP01215 116 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 CECR9P0C854 216 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 CTRLP40313 264 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 Q0VG73 95 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 MRPL49Q13405 166 aaKnown RBP10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 FXYD3Q14802 87 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 PRAMEF5Q5TYX0 476 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 Q6ZVH6 145 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 HES4Q9HCC6 221 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 GVINP1Q7Z2Y8 2422 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 INTS1Q8N201 2190 aaKnown RBP10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 NDUFB8O95169 186 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 PMCHP20382 165 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 VDAC2P45880 294 aaPredicted RBP10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 SLC35E4Q6ICL7 350 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 WDR82Q6UXN9 313 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 DNAJC4Q9NNZ3 241 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 NRN1Q9NPD7 142 aa10.97□□□□□ -0.65
PDZRN3-208ENST00000479530 ACTL6BO94805 426 aa10.96□□□□□ -0.65
PDZRN3-208ENST00000479530 CHRNB4P30926 498 aa10.96□□□□□ -0.65
PDZRN3-208ENST00000479530 DUTP33316 252 aaKnown RBP10.96□□□□□ -0.65
PDZRN3-208ENST00000479530 AMTP48728 403 aa10.96□□□□□ -0.65
PDZRN3-208ENST00000479530 GUSBP1Q15486 140 aa10.96□□□□□ -0.65
PDZRN3-208ENST00000479530 RPEL1Q2QD12 228 aa10.96□□□□□ -0.65
PDZRN3-208ENST00000479530 SPATA45Q537H7 98 aa10.96□□□□□ -0.65
PDZRN3-208ENST00000479530 DEFB124Q8NES8 71 aa10.96□□□□□ -0.65
PDZRN3-208ENST00000479530 UHRF2Q96PU4 802 aa10.96□□□□□ -0.65
PDZRN3-208ENST00000479530 WNT10AQ9GZT5 417 aa10.96□□□□□ -0.65
PDZRN3-208ENST00000479530 NAT8BQ9UHF3 227 aa10.96□□□□□ -0.65
PDZRN3-208ENST00000479530 TRAV34A0A0B4J273 112 aa10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 RPL39P5Q59GN2 51 aa10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 COL5A1-AS1Q5SY13 56 aa10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 ETFRF1Q6IPR1 90 aa10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 ACP7Q6ZNF0 438 aa10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 FAM19A2Q8N3H0 131 aa10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 STPG3Q8N7X2 389 aa10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 OR4P4Q8NGL7 312 aa10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 HSD17B10Q99714 261 aaKnown RBP10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 SFXN3Q9BWM7 321 aa10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 LSM4Q9Y4Z0 139 aaKnown RBP10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 TNCP24821 2201 aa10.96□□□□□ -0.66
PDZRN3-208ENST00000479530 BSNQ9UPA5 3926 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 A0A1W2PS18 150 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 TIMM8AO60220 97 aaPredicted RBP10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 MPDU1O75352 247 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 IGKV3-15P01624 115 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 ZNF83P51522 516 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 EDDM3AQ14507 147 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 CLEC2AQ6UVW9 174 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 C1orf174Q8IYL3 243 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 ATOH7Q8N100 152 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 CD177Q8N6Q3 437 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 OR4A16Q8NH70 328 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 C22orf15Q8WYQ4 148 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 FAM122AQ96E09 287 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 LOXL4Q96JB6 756 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 SLC35E1Q96K37 410 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 ZFP30Q9Y2G7 519 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 CENPWQ5EE01 88 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 INO80CQ6PI98 192 aaPredicted RBP10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 TXNDC17Q9BRA2 123 aa10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 HEATR1Q9H583 2144 aaKnown RBP10.95□□□□□ -0.66
PDZRN3-208ENST00000479530 ITGB1BP1O14713 200 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 HYPMO75409 117 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 MYOD1P15172 320 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 CRYBB3P26998 211 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 HTD2P86397 168 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 PQLC2Q6ZP29 291 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 C1orf229Q6ZS94 237 aaPredicted RBP10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 MIR17HGQ75NE6 70 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 RNF2Q99496 336 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 ZNF586Q9NXT0 402 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 RIF1Q5UIP0 2472 aaKnown RBP10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 IGHV3OR15-7A0A075B7D8 119 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 TRGV10A0A0A0MS01 117 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 IGHG3P01860 377 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 GPR12P47775 334 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 RELBQ01201 579 aa10.94□□□□□ -0.66
PDZRN3-208ENST00000479530 MRPL54Q6P161 138 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms