RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TRAV24A0A0B4J272 114 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 A0A0G2JMM0 328 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 A0A1W2PPB8 328 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 KIR3DP1A8MWS1 328 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 H3BRM9 83 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 SYNGR1O43759 233 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 FABP6P51161 128 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 RAB30Q15771 203 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 TMEM196Q5HYL7 178 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 ZNF788Q6ZQV5 615 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 BHLHA15Q7RTS1 189 aaPredicted RBP17.6■□□□□ 0.41
SDF4-206ENST00000478938 C1RLQ9NZP8 487 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 TSSC4Q9Y5U2 329 aaPredicted RBP17.6■□□□□ 0.41
SDF4-206ENST00000478938 SPCS1Q9Y6A9 102 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 REG1BP48304 166 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 RPL30P62888 115 aaKnown RBP17.6■□□□□ 0.41
SDF4-206ENST00000478938 OR52E5Q8NH55 327 aa17.6■□□□□ 0.41
SDF4-206ENST00000478938 TMEM265A0A087WTH1 108 aa17.59■□□□□ 0.41
SDF4-206ENST00000478938 NPIPA3F8WFD2 350 aa17.59■□□□□ 0.41
SDF4-206ENST00000478938 LEPROTL1O95214 131 aa17.59■□□□□ 0.41
SDF4-206ENST00000478938 B4GALT1P15291 398 aa17.59■□□□□ 0.41
SDF4-206ENST00000478938 CAMPP49913 170 aa17.59■□□□□ 0.41
SDF4-206ENST00000478938 ZNF808Q8N4W9 903 aaPredicted RBP17.59■□□□□ 0.41
SDF4-206ENST00000478938 MS4A5Q9H3V2 200 aa17.59■□□□□ 0.41
SDF4-206ENST00000478938 IGLV2-8P01709 118 aa17.59■□□□□ 0.41
SDF4-206ENST00000478938 HNRNPA1P09651 372 aaKnown RBP eCLIP17.59■□□□□ 0.41
SDF4-206ENST00000478938 CA6P23280 308 aa17.59■□□□□ 0.41
SDF4-206ENST00000478938 METTL7AQ9H8H3 244 aa17.59■□□□□ 0.41
SDF4-206ENST00000478938 F5P12259 2224 aa17.59■□□□□ 0.41
SDF4-206ENST00000478938 CCL5P13501 91 aa17.58■□□□□ 0.41
SDF4-206ENST00000478938 CD24P25063 80 aa17.58■□□□□ 0.41
SDF4-206ENST00000478938 RAB31Q13636 194 aa17.58■□□□□ 0.41
SDF4-206ENST00000478938 CCDC144NLQ6NUI1 221 aa17.58■□□□□ 0.41
SDF4-206ENST00000478938 NTF4P34130 210 aa17.58■□□□□ 0.4
SDF4-206ENST00000478938 FOXA3P55318 350 aaPredicted RBP17.58■□□□□ 0.4
SDF4-206ENST00000478938 KIR3DS1Q14943 382 aa17.58■□□□□ 0.4
SDF4-206ENST00000478938 EFNB3Q15768 340 aa17.58■□□□□ 0.4
SDF4-206ENST00000478938 FGFBP3Q8TAT2 258 aa17.58■□□□□ 0.4
SDF4-206ENST00000478938 WIPF2Q8TF74 440 aaPredicted RBP17.58■□□□□ 0.4
SDF4-206ENST00000478938 PSMB11A5LHX3 300 aa17.57■□□□□ 0.4
SDF4-206ENST00000478938 COX8AP10176 69 aa17.57■□□□□ 0.4
SDF4-206ENST00000478938 COL6A3P12111 3177 aa17.57■□□□□ 0.4
SDF4-206ENST00000478938 WDFY3Q8IZQ1 3526 aa17.57■□□□□ 0.4
SDF4-206ENST00000478938 C21orf140B9A014 251 aa17.57■□□□□ 0.4
SDF4-206ENST00000478938 SPEM1Q8N4L4 309 aa17.57■□□□□ 0.4
SDF4-206ENST00000478938 ZNF355PQ9NSJ1 428 aa17.57■□□□□ 0.4
SDF4-206ENST00000478938 TRBV6-6A0A0A6YYG2 114 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 GAGE12HA6NDE8 117 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 NEURL1O76050 574 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 P04436 131 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 KIR2DL1P43626 348 aaPredicted RBP17.56■□□□□ 0.4
SDF4-206ENST00000478938 FAM53AQ6NSI3 398 aaPredicted RBP17.56■□□□□ 0.4
SDF4-206ENST00000478938 VSTM2AQ8TAG5 236 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 C5orf30Q96GV9 206 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 KIAA0100Q14667 2235 aaKnown RBP17.56■□□□□ 0.4
SDF4-206ENST00000478938 C17orf98A8MV24 154 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 NPIPB11E5RHQ5 1161 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 MKXQ8IYA7 352 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 TPRX1Q8N7U7 411 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 OR2Z1Q8NG97 314 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 MS4A6AQ9H2W1 248 aa17.56■□□□□ 0.4
SDF4-206ENST00000478938 NUP35Q8NFH5 326 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 OR5A1Q8NGJ0 315 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 GCM1Q9NP62 436 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 DLL3Q9NYJ7 618 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 TIMM8BQ9Y5J9 83 aaPredicted RBP17.55■□□□□ 0.4
SDF4-206ENST00000478938 PTPRSQ13332 1948 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 FER1L5A0AVI2 2057 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 LTBP2Q14767 1821 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 A6NDN8 102 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 ACTL6BO94805 426 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 H2BFWTQ7Z2G1 175 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 FAM222BQ8WU58 562 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 CFAP54Q96N23 3096 aa17.55■□□□□ 0.4
SDF4-206ENST00000478938 LOC102723996A0A087X1L8 192 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 A0A1W2PPM0 123 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 FBLL1A6NHQ2 334 aaKnown RBP17.54■□□□□ 0.4
SDF4-206ENST00000478938 MPDU1O75352 247 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 AREGP15514 252 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 BRWD1-AS2P59051 145 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 LINC00205P59089 165 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 FAM69BQ5VUD6 431 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 SERTM2A0A1B0GWG4 89 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 A0A1W2PRE2 83 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 OR2J3O76001 311 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 PSG5Q15238 335 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 WIPI1Q5MNZ9 446 aaPredicted RBP17.54■□□□□ 0.4
SDF4-206ENST00000478938 MIR17HGQ75NE6 70 aa17.54■□□□□ 0.4
SDF4-206ENST00000478938 A0A1W2PQF6 199 aa17.53■□□□□ 0.4
SDF4-206ENST00000478938 FASLGP48023 281 aa17.53■□□□□ 0.4
SDF4-206ENST00000478938 KRTAP27-1Q3LI81 207 aa17.53■□□□□ 0.4
SDF4-206ENST00000478938 CD300EQ496F6 205 aaPredicted RBP17.53■□□□□ 0.4
SDF4-206ENST00000478938 Q6ZR03 302 aa17.53■□□□□ 0.4
SDF4-206ENST00000478938 IGF2BP2-AS1Q96M15 143 aa17.53■□□□□ 0.4
SDF4-206ENST00000478938 RABAC1Q9UI14 185 aa17.53■□□□□ 0.4
SDF4-206ENST00000478938 LYSMD4Q5XG99 296 aa17.52■□□□□ 0.4
SDF4-206ENST00000478938 C7orf61Q8IZ16 206 aa17.52■□□□□ 0.4
SDF4-206ENST00000478938 BLNKQ8WV28 456 aa17.52■□□□□ 0.4
SDF4-206ENST00000478938 H1FXQ92522 213 aaKnown RBP17.52■□□□□ 0.4
SDF4-206ENST00000478938 C1orf159Q96HA4 380 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms