RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 IGHV1-46P01743 117 aa11.9□□□□□ -0.51
NPHP4-208ENST00000478423 OTOGLQ3ZCN5 2332 aa11.89□□□□□ -0.51
NPHP4-208ENST00000478423 M0R2Z0 102 aa11.89□□□□□ -0.51
NPHP4-208ENST00000478423 BMPR1BO00238 502 aa11.89□□□□□ -0.51
NPHP4-208ENST00000478423 LILRA1O75019 489 aa11.89□□□□□ -0.51
NPHP4-208ENST00000478423 PAFAH1B2P68402 229 aa11.89□□□□□ -0.51
NPHP4-208ENST00000478423 WDR25Q64LD2 544 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-208ENST00000478423 OR51M1Q9H341 326 aa11.89□□□□□ -0.51
NPHP4-208ENST00000478423 Q6ZS92 163 aa11.89□□□□□ -0.51
NPHP4-208ENST00000478423 PLXND1Q9Y4D7 1925 aa11.89□□□□□ -0.51
NPHP4-208ENST00000478423 SAA2-SAA4A0A096LPE2 208 aa11.89□□□□□ -0.51
NPHP4-208ENST00000478423 SAA2P0DJI9 122 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-208ENST00000478423 RPL29P47914 159 aaKnown RBP11.89□□□□□ -0.51
NPHP4-208ENST00000478423 HNRNPA3P51991 378 aaKnown RBP11.89□□□□□ -0.51
NPHP4-208ENST00000478423 TBR1Q16650 682 aa11.89□□□□□ -0.51
NPHP4-208ENST00000478423 RAMP3O60896 148 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 TFPI2P48307 235 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 HOXA4Q00056 320 aaPredicted RBP11.88□□□□□ -0.51
NPHP4-208ENST00000478423 TMEM42Q69YG0 159 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 CCL19Q99731 98 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 TRAV34A0A0B4J273 112 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 OR2T8A6NH00 312 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 ETV2O00321 342 aaPredicted RBP11.88□□□□□ -0.51
NPHP4-208ENST00000478423 HGFACQ04756 655 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 RTN4RL2Q86UN3 420 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 METTL26Q96S19 204 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 C19orf24Q9BVV8 132 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 SLC25A15Q9Y619 301 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 TMEM250H0YL14 139 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 ID3Q02535 119 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 TFF3Q07654 80 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 WDFY1Q8IWB7 410 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 C18orf12Q96KH6 178 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 IFI27L2Q9H2X8 130 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 TRAV30A0A087WSZ9 112 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 IGHG3P01860 377 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 IL4P05112 153 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 IL6RP08887 468 aaPredicted RBP11.88□□□□□ -0.51
NPHP4-208ENST00000478423 GCHFRP30047 84 aa11.88□□□□□ -0.51
NPHP4-208ENST00000478423 SUPT4H1P63272 117 aaKnown RBP11.88□□□□□ -0.51
NPHP4-208ENST00000478423 ZNF324BQ6AW86 544 aaPredicted RBP11.88□□□□□ -0.51
NPHP4-208ENST00000478423 PRSS1P07477 247 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 TMEM183BQ1AE95 376 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 TMEM78Q5T7P6 136 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 ZNF525Q8N782 197 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 DYNLRB2Q8TF09 96 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 DOCK11Q5JSL3 2073 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 PLXNA2O75051 1894 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 NCOR2Q9Y618 2525 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 APCSP02743 223 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 IGFBP2P18065 325 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 PTTG1IPP53801 180 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 IFT22Q9H7X7 185 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 TRAV20A0A0B4J274 112 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 CGB1A6NKQ9 187 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 NAPSAO96009 420 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 IGKV1D-33P01593 117 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 IGKV1-33P01594 117 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 CCKARP32238 428 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 C16orf92Q96LL3 132 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 HSPB7Q9UBY9 170 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 S4R3C0 116 aa11.87□□□□□ -0.51
NPHP4-208ENST00000478423 RPL7P18124 248 aaKnown RBP11.86□□□□□ -0.51
NPHP4-208ENST00000478423 BIVMQ86UB2 503 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 PTPN13Q12923 2485 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 SONP18583 2426 aaKnown RBP11.86□□□□□ -0.51
NPHP4-208ENST00000478423 IGHV3OR16-13A0A075B7E8 117 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 IGHV3-74A0A0B4J1X5 117 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 AGAP20933 346 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 FOXL2NBQ6ZUU3 175 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 GGACTQ9BVM4 153 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 PROK2Q9HC23 129 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 ELOBQ15370 118 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 SPANXN1Q5VSR9 72 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 ZNF343Q6P1L6 599 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 ZNF581Q9P0T4 197 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 MBD3L4A6NDZ8 208 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-208ENST00000478423 MBD3L3A6NE82 208 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-208ENST00000478423 MBD3L5A6NJ08 208 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-208ENST00000478423 SAA1P0DJI8 122 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-208ENST00000478423 DUTP33316 252 aaKnown RBP11.86□□□□□ -0.51
NPHP4-208ENST00000478423 QRFPP83859 136 aa11.86□□□□□ -0.51
NPHP4-208ENST00000478423 MBD3L2Q8NHZ7 208 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-208ENST00000478423 ZNF506Q5JVG8 444 aa11.85□□□□□ -0.51
NPHP4-208ENST00000478423 CD55P08174 381 aa11.85□□□□□ -0.51
NPHP4-208ENST00000478423 GATA2P23769 480 aaPredicted RBP11.85□□□□□ -0.51
NPHP4-208ENST00000478423 CYP2G1PQ6ZSU1 146 aa11.85□□□□□ -0.51
NPHP4-208ENST00000478423 WFIKKN1Q96NZ8 548 aa11.85□□□□□ -0.51
NPHP4-208ENST00000478423 A0A1W2PS18 150 aa11.85□□□□□ -0.51
NPHP4-208ENST00000478423 LINC00305Q7Z4B0 112 aa11.85□□□□□ -0.51
NPHP4-208ENST00000478423 TEX50A0A1B0GTY4 177 aa11.84□□□□□ -0.51
NPHP4-208ENST00000478423 A8MXK9 166 aa11.84□□□□□ -0.51
NPHP4-208ENST00000478423 MBNL2Q5VZF2 373 aaKnown RBP11.84□□□□□ -0.51
NPHP4-208ENST00000478423 LRTM2Q8N967 370 aa11.84□□□□□ -0.51
NPHP4-208ENST00000478423 FAM168AQ92567 244 aa11.84□□□□□ -0.51
NPHP4-208ENST00000478423 DENND4CQ5VZ89 1909 aa11.84□□□□□ -0.51
NPHP4-208ENST00000478423 TCAPO15273 167 aa11.84□□□□□ -0.51
NPHP4-208ENST00000478423 MT-ND6P03923 174 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms