RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CEACAM19Q7Z692 300 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 FAM89BQ8N5H3 189 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 TMEM217Q8N7C4 229 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 LINC00469Q8N7U9 141 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 SRSF12Q8WXF0 261 aaKnown RBP3.36□□□□□ -1.87
CKS1B-207ENST00000477676 GGHQ92820 318 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 SNAPC3Q92966 411 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 RRNAD1Q96FB5 475 aaKnown RBP3.36□□□□□ -1.87
CKS1B-207ENST00000477676 ZNF414Q96IQ9 312 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 USMG5Q96IX5 58 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 UQCC2Q9BRT2 126 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 GGTLC1Q9BX51 225 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 ZNF430Q9H8G1 570 aaPredicted RBP3.36□□□□□ -1.87
CKS1B-207ENST00000477676 Q9N2K0 584 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 SLC35D1Q9NTN3 355 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 SDHAF2Q9NX18 166 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 SLC2A8Q9NY64 477 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 RDH8Q9NYR8 311 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 DIMT1Q9UNQ2 313 aaKnown RBP3.36□□□□□ -1.87
CKS1B-207ENST00000477676 RPL36Q9Y3U8 105 aaKnown RBP3.36□□□□□ -1.87
CKS1B-207ENST00000477676 CHTOPQ9Y3Y2 248 aaKnown RBP3.36□□□□□ -1.87
CKS1B-207ENST00000477676 LRRC42Q9Y546 428 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
CKS1B-207ENST00000477676 IGKV1D-8A0A087WSZ0 117 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 LOC102724200A0A096LPH7 203 aaPredicted RBP3.35□□□□□ -1.87
CKS1B-207ENST00000477676 NUPR2A6NF83 97 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 SNTNA6NMZ2 147 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 AIREO43918 545 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 APOA2P02652 100 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 C8orf88P0DMB2 117 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 MYOD1P15172 320 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 CELP19835 753 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 CBLN1P23435 193 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 CD40LGP29965 261 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 LGALS7P47929 136 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 PPP5CP53041 499 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 BRWD1-AS2P59051 145 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 RPL30P62888 115 aaKnown RBP3.35□□□□□ -1.87
CKS1B-207ENST00000477676 ATP5G2Q06055 141 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 TNXAQ16473 311 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 TATDN3Q17R31 274 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 KLK9Q2XQG4 91 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 C15orf32Q32M92 178 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 LGALS9CQ6DKI2 356 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 WDR73Q6P4I2 378 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 UNQ9165/PRO28630Q6UXU0 137 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 TMPRSS11AQ6ZMR5 421 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 TTC9CQ8N5M4 171 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 DYNLRB2Q8TF09 96 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 PHLDA1Q8WV24 401 aaPredicted RBP3.35□□□□□ -1.87
CKS1B-207ENST00000477676 ARHGAP5-AS1Q96IT6 56 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 Q96MT0 163 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 NEDD4LQ96PU5 975 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 TXN2Q99757 166 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 TMEM59Q9BXS4 323 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 ABRACLQ9P1F3 81 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 KLK9Q9UKQ9 250 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 KCNK7Q9Y2U2 307 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 EXOSC1Q9Y3B2 195 aaKnown RBP3.35□□□□□ -1.87
CKS1B-207ENST00000477676 ORC6Q9Y5N6 252 aa3.35□□□□□ -1.87
CKS1B-207ENST00000477676 TRBV6-7A0A0A0MS04 114 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 A0A0B4J293 547 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 IGHV3-35A0A0C4DH35 117 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 MFSD2BA6NFX1 497 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 FAM223BA6NKX1 122 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 A8MWP6 167 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 LGALS9O00182 355 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 NDUFB4O95168 129 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 CRYZL1O95825 349 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 GSTT2P0CG29 244 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 GSTT2BP0CG30 244 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 SAA1P0DJI8 122 aaPredicted RBP3.34□□□□□ -1.87
CKS1B-207ENST00000477676 AREGP15514 252 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 ZBTB25P24278 435 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 FCGR2BP31994 310 aaPredicted RBP3.34□□□□□ -1.87
CKS1B-207ENST00000477676 DUTP33316 252 aaKnown RBP3.34□□□□□ -1.87
CKS1B-207ENST00000477676 UBE2KP61086 200 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 ST3GAL4Q11206 333 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 RCN1Q15293 331 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 P2RY14Q15391 338 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 ACSM3Q53FZ2 586 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 ZNF57Q68EA5 555 aaPredicted RBP3.34□□□□□ -1.87
CKS1B-207ENST00000477676 BTNL8Q6UX41 500 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 CLEC19AQ6UXS0 136 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 MOB1BQ7L9L4 216 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 GPHB5Q86YW7 130 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 FAM223AQ8IWN6 122 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 VKORC1L1Q8N0U8 176 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 TEX45Q8NA69 505 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 UXS1Q8NBZ7 420 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.34□□□□□ -1.87
CKS1B-207ENST00000477676 NECAP1Q8NC96 275 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 OR52B4Q8NGK2 314 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 MAFIPQ8WZ33 124 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 TMEM80Q96HE8 168 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 ATP6V0BQ99437 205 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 CABLES2Q9BTV7 478 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 PECRQ9BY49 303 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms