RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ADTRPQ96IZ2 230 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 HYLS1Q96M11 299 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 TP53RKQ96S44 253 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 P2RX4Q99571 388 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 SPIN2AQ99865 258 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 RNF5Q99942 180 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 SPIN2BQ9BPZ2 258 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 NMES1Q9C002 83 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 GNB4Q9HAV0 340 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 AURKAIP1Q9NWT8 199 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-221ENST00000477561 COMMD9Q9P000 198 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 TMED3Q9Y3Q3 217 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 NOTCH3Q9UM47 2321 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 C13orf42A0A1B0GVH6 325 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 SRRM4A7MD48 611 aaKnown RBP6.44□□□□□ -1.38
HDAC6-221ENST00000477561 SHOXO15266 292 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 SOX15O60248 233 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 CNIH1O95406 144 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 SIX6O95475 246 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 CDS2O95674 445 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 IGLV2-23P01705 113 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 HOXB5P09067 269 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 DUTP33316 252 aaKnown RBP6.44□□□□□ -1.38
HDAC6-221ENST00000477561 RAB9AP51151 201 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 H2BFSP57053 126 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 KRTAP10-11P60412 298 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 RPL30P62888 115 aaKnown RBP6.44□□□□□ -1.38
HDAC6-221ENST00000477561 EIF4EBP1Q13541 118 aaPredicted RBP6.44□□□□□ -1.38
HDAC6-221ENST00000477561 KIAA0141Q14154 515 aaPredicted RBP6.44□□□□□ -1.38
HDAC6-221ENST00000477561 FXYD3Q14802 87 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 RTL8BQ17RB0 113 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 OR2B11Q5JQS5 317 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 TMEM268Q5VZI3 342 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 UNQ5815/PRO19632Q6UWF5 114 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 ZNF562Q6V9R5 426 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 NOXA1Q86UR1 476 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 ZNF491Q8N8L2 437 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 OR11H1Q8NG94 326 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 GRPEL2Q8TAA5 225 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 MRAPQ8TCY5 172 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 TCTEX1D2Q8WW35 142 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 RBPMSQ93062 196 aaKnown RBP6.44□□□□□ -1.38
HDAC6-221ENST00000477561 C2orf50Q96LR7 162 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 HARBI1Q96MB7 349 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 MS4A10Q96PG2 267 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 GPHA2Q96T91 129 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 PRR13Q9NZ81 148 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 ZNF580Q9UK33 172 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 PRELID3BQ9Y3B1 194 aa6.44□□□□□ -1.38
HDAC6-221ENST00000477561 CCSO14618 274 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 FCGR3BO75015 233 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 ADAP1O75689 374 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 SPDEFO95238 335 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 CRYZL1O95825 349 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 IGHV3-11P01762 117 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 CRYGBP07316 175 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 PET100P0DJ07 73 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 APELAP0DMC3 54 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 LGALS7P47929 136 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 SSBP2P81877 361 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-221ENST00000477561 PRR20EP86478 221 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 PRR20CP86479 221 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 PRR20DP86480 221 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 PRR20BP86481 221 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 PRR20AP86496 221 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 TAGLNQ01995 201 aaKnown RBP6.43□□□□□ -1.38
HDAC6-221ENST00000477561 TMEM267Q0VDI3 215 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-221ENST00000477561 IAH1Q2TAA2 248 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-221ENST00000477561 TMEM177Q53S58 311 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 C19orf54Q5BKX5 351 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 GGNBP1Q5YKI7 109 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 THOC7Q6I9Y2 204 aaKnown RBP6.43□□□□□ -1.38
HDAC6-221ENST00000477561 SELENOHQ8IZQ5 122 aaKnown RBP6.43□□□□□ -1.38
HDAC6-221ENST00000477561 SLC35G3Q8N808 338 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 OR5T1Q8NG75 326 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 OR1N2Q8NGR9 330 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 RNASE11Q8TAA1 199 aaKnown RBP6.43□□□□□ -1.38
HDAC6-221ENST00000477561 MYOZ3Q8TDC0 251 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 C4orf3Q8WVX3 66 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 DDB2Q92466 427 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 ARPC1AQ92747 370 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 UBE2E2Q96LR5 201 aa6.43□□□□□ -1.38
HDAC6-221ENST00000477561 FOXA2Q9Y261 457 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-221ENST00000477561 WI2-2373I1.2A0A1W2PRP0 233 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 SMLR1H3BR10 107 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 I3L521 148 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 RBFOX2O43251 390 aaKnown RBP eCLIP6.42□□□□□ -1.38
HDAC6-221ENST00000477561 HPRT1P00492 218 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 RRASP10301 218 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 SLC25A6P12236 298 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 LPAR6P43657 344 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 AKR1C2P52895 323 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 CRIP2P52943 208 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-221ENST00000477561 TPPP2P59282 170 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 SMCO1Q147U7 214 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 AKIRIN2Q53H80 203 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 REC114Q7Z4M0 266 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 LYZL2Q7Z4W2 148 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 FAM219AQ8IW50 185 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 SPAG16Q8N0X2 631 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms