RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 APELAP0DMC3 54 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 CXCL3P19876 107 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 H2BFSP57053 126 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 TNFRSF9Q07011 255 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 CXorf66Q5JRM2 361 aaPredicted RBP12.74□□□□□ -0.37
VHL-203ENST00000477538 UNQ5815/PRO19632Q6UWF5 114 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 STPG2Q8N412 459 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.74□□□□□ -0.37
VHL-203ENST00000477538 LFNGQ8NES3 379 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 OR11H7Q8NGC8 314 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 OR10W1Q8NGF6 305 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 OR4F5Q8NH21 305 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 PLEKHA3Q9HB20 300 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 SERTAD4Q9NUC0 356 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 WSB1Q9Y6I7 421 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 TRAV41A0A0B4J266 112 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 A0A1W2PN81 502 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 IGLC7A0M8Q6 106 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 CEBPZOSA8MTT3 80 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 G3V318 75 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 SCGB1D2O95969 90 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 HKR1P10072 659 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 CHRNA7P36544 502 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 NKX2-1P43699 371 aaPredicted RBP12.73□□□□□ -0.37
VHL-203ENST00000477538 HOXA1P49639 335 aaPredicted RBP12.73□□□□□ -0.37
VHL-203ENST00000477538 TMEM267Q0VDI3 215 aaPredicted RBP12.73□□□□□ -0.37
VHL-203ENST00000477538 PDLIM3Q53GG5 364 aaPredicted RBP12.73□□□□□ -0.37
VHL-203ENST00000477538 AKIRIN2Q53H80 203 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 LINC01006Q8NI28 216 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 SRSF8Q9BRL6 282 aaKnown RBP12.73□□□□□ -0.37
VHL-203ENST00000477538 NMES1Q9C002 83 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 RBKSQ9H477 322 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 ENY2Q9NPA8 101 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 ZNF580Q9UK33 172 aa12.73□□□□□ -0.37
VHL-203ENST00000477538 A0A1B0GVG6 124 aa12.72□□□□□ -0.37
VHL-203ENST00000477538 MED6O75586 246 aa12.72□□□□□ -0.37
VHL-203ENST00000477538 AREGP15514 252 aa12.72□□□□□ -0.37
VHL-203ENST00000477538 CYCSP99999 105 aaKnown RBP12.72□□□□□ -0.37
VHL-203ENST00000477538 ID3Q02535 119 aa12.72□□□□□ -0.37
VHL-203ENST00000477538 C19orf54Q5BKX5 351 aa12.72□□□□□ -0.37
VHL-203ENST00000477538 ASPHD1Q5U4P2 390 aa12.72□□□□□ -0.37
VHL-203ENST00000477538 HSD17B13Q7Z5P4 300 aaPredicted RBP12.72□□□□□ -0.37
VHL-203ENST00000477538 MRPL41Q8IXM3 137 aaKnown RBP12.72□□□□□ -0.37
VHL-203ENST00000477538 TMEM68Q96MH6 324 aa12.72□□□□□ -0.37
VHL-203ENST00000477538 MAGT1Q9H0U3 335 aa12.72□□□□□ -0.37
VHL-203ENST00000477538 WRBO00258 174 aa12.71□□□□□ -0.37
VHL-203ENST00000477538 MBPP02686 304 aaPredicted RBP12.71□□□□□ -0.37
VHL-203ENST00000477538 REG1AP05451 166 aa12.71□□□□□ -0.37
VHL-203ENST00000477538 OR13C7P0DN81 318 aa12.71□□□□□ -0.37
VHL-203ENST00000477538 WT1-ASQ06250 92 aa12.71□□□□□ -0.37
VHL-203ENST00000477538 IL15RAQ13261 267 aa12.71□□□□□ -0.37
VHL-203ENST00000477538 DTD1Q8TEA8 209 aa12.71□□□□□ -0.37
VHL-203ENST00000477538 GON7Q9BXV9 100 aa12.71□□□□□ -0.37
VHL-203ENST00000477538 ZNF436Q9C0F3 470 aaPredicted RBP12.71□□□□□ -0.37
VHL-203ENST00000477538 ATRQ13535 2644 aa12.7□□□□□ -0.38
VHL-203ENST00000477538 CLPSL1A2RUU4 121 aa12.7□□□□□ -0.38
VHL-203ENST00000477538 INS-IGF2F8WCM5 200 aa12.7□□□□□ -0.38
VHL-203ENST00000477538 SYNGR2O43760 224 aa12.7□□□□□ -0.38
VHL-203ENST00000477538 MDKP21741 143 aaPredicted RBP12.7□□□□□ -0.38
VHL-203ENST00000477538 PSMB6P28072 239 aa12.7□□□□□ -0.38
VHL-203ENST00000477538 S100A10P60903 97 aa12.7□□□□□ -0.38
VHL-203ENST00000477538 POLR2GP62487 172 aaKnown RBP eCLIP12.7□□□□□ -0.38
VHL-203ENST00000477538 ERHP84090 104 aaKnown RBP12.7□□□□□ -0.38
VHL-203ENST00000477538 SRSF4Q08170 494 aaKnown RBP12.7□□□□□ -0.38
VHL-203ENST00000477538 KRTAP24-1Q3LI83 254 aa12.7□□□□□ -0.38
VHL-203ENST00000477538 FAM110DQ8TAY7 271 aaPredicted RBP12.7□□□□□ -0.38
VHL-203ENST00000477538 WDR89Q96FK6 387 aaPredicted RBP12.7□□□□□ -0.38
VHL-203ENST00000477538 WNT10AQ9GZT5 417 aa12.7□□□□□ -0.38
VHL-203ENST00000477538 HEYLQ9NQ87 328 aaPredicted RBP12.7□□□□□ -0.38
VHL-203ENST00000477538 LSM5Q9Y4Y9 91 aaKnown RBP12.7□□□□□ -0.38
VHL-203ENST00000477538 PSMB11A5LHX3 300 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 NPIPB5A8MRT5 1133 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 K7EPK0 472 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 IAPPP10997 89 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 SLC35B1P78383 322 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 CFHR3Q02985 330 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 RAB32Q13637 225 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 C11orf87Q6NUJ2 197 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 CENPVQ7Z7K6 275 aaPredicted RBP12.69□□□□□ -0.38
VHL-203ENST00000477538 TTC9CQ8N5M4 171 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 OR2C3Q8N628 320 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 KLHDC1Q8N7A1 406 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 OR5T1Q8NG75 326 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 HIPK2Q9H2X6 1198 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 RCL1Q9Y2P8 373 aaKnown RBP12.69□□□□□ -0.38
VHL-203ENST00000477538 RNF114Q9Y508 228 aa12.69□□□□□ -0.38
VHL-203ENST00000477538 A0A1B0GUS0 222 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 SSSCA1O60232 199 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 SOX15O60248 233 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 FBXO24O75426 580 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 GIPP09681 153 aaPredicted RBP12.68□□□□□ -0.38
VHL-203ENST00000477538 CTRB1P17538 263 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 PPIFP30405 207 aaKnown RBP12.68□□□□□ -0.38
VHL-203ENST00000477538 BCAP31P51572 246 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 FOXL1Q12952 345 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 LRRC37A5PQ49AS3 106 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 CTRB2Q6GPI1 263 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 ZNF329Q86UD4 541 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 CHAC2Q8WUX2 184 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 ASB13Q8WXK3 278 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms