RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 LIN7CQ9NUP9 197 aaKnown RBP3.42□□□□□ -1.86
VPS13D-206ENST00000476045 COA4Q9NYJ1 87 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 IL36GQ9NZH8 169 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 ZNRD1Q9P1U0 126 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 IL36RNQ9UBH0 155 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 POLDIP2Q9Y2S7 368 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 STRAPQ9Y3F4 350 aaKnown RBP3.42□□□□□ -1.86
VPS13D-206ENST00000476045 FBXO7Q9Y3I1 522 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 STAB2Q8WWQ8 2551 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 KIAA2026Q5HYC2 2103 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 IGKV1D-13A0A0B4J2D9 117 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 CENPVL3A0A0U1RRI6 287 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 A0A1W2PPE3 182 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 MEX3AA1L020 520 aaKnown RBP3.41□□□□□ -1.86
VPS13D-206ENST00000476045 C7orf77A4D0Y5 90 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 UMAD1C9J7I0 102 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 J3QT63 122 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 K7N7A8 449 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 WRBO00258 174 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 NPFFO15130 113 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 TRIAP1O43715 76 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 SSSCA1O60232 199 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 CST7O76096 145 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 SCGB1D1O95968 90 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 GYPAP02724 150 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 ARG1P05089 322 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 IGKV1-13P0DP09 117 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 MDKP21741 143 aaPredicted RBP3.41□□□□□ -1.86
VPS13D-206ENST00000476045 LMO1P25800 156 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 NKX2-1P43699 371 aaPredicted RBP3.41□□□□□ -1.86
VPS13D-206ENST00000476045 IER3P46695 156 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 HAAOP46952 286 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 DYNLT3P51808 116 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 UBE2E1P51965 193 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 RAB5BP61020 215 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 SNRPEP62304 92 aaKnown RBP3.41□□□□□ -1.86
VPS13D-206ENST00000476045 GNMTQ14749 295 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 HMGN3Q15651 99 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 HAGHQ16775 308 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 PDLIM3Q53GG5 364 aaPredicted RBP3.41□□□□□ -1.86
VPS13D-206ENST00000476045 CXorf66Q5JRM2 361 aaPredicted RBP3.41□□□□□ -1.86
VPS13D-206ENST00000476045 FIP1L1Q6UN15 594 aaKnown RBP3.41□□□□□ -1.86
VPS13D-206ENST00000476045 VMO1Q7Z5L0 202 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 MKXQ8IYA7 352 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 Q8IYB0 196 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 GAPTQ8N292 157 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 COMMD1Q8N668 190 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 FAM216BQ8N7L0 139 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 C15orf54Q8N8G6 183 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 LRTM2Q8N967 370 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 SUMF2Q8NBJ7 301 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 UBAC2Q8NBM4 344 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 LY6G5BQ8NDX9 201 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 OR4C13Q8NGP0 309 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 OR2G3Q8NGZ4 309 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 UBALD1Q8TB05 177 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 PLPPR1Q8TBJ4 325 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 LHX4Q969G2 390 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 ISOC2Q96AB3 205 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 GALNT14Q96FL9 552 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 DUX5Q96PT3 197 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 HIST1H2AAQ96QV6 131 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 C12orf57Q99622 126 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 RARRES2Q99969 163 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 C11orf1Q9H5F2 150 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 C16orf95Q9H693 158 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 Q9N2K0 584 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 C1RLQ9NZP8 487 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 ONECUT1Q9UBC0 465 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 SLC25A10Q9UBX3 287 aaPredicted RBP3.41□□□□□ -1.86
VPS13D-206ENST00000476045 PUS1Q9Y606 427 aaKnown RBP eCLIP3.41□□□□□ -1.86
VPS13D-206ENST00000476045 DNAH3Q8TD57 4116 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 TENM3Q9P273 2699 aa3.41□□□□□ -1.86
VPS13D-206ENST00000476045 IGHV3OR16-10A0A075B7F0 116 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 IGKV1-6A0A0C4DH72 117 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 IGHV3-64DA0A0J9YX35 117 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 A0A0U1RQK1 487 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 MDFIC2A0A1B0GVS7 189 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 RBFOX3A6NFN3 312 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF727A8MUV8 499 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.4□□□□□ -1.87
VPS13D-206ENST00000476045 CDIPTO14735 213 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 TXNL1O43396 289 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 PITX3O75364 302 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 PGLYRP1O75594 196 aaPredicted RBP3.4□□□□□ -1.87
VPS13D-206ENST00000476045 EIF3GO75821 320 aaKnown RBP eCLIP3.4□□□□□ -1.87
VPS13D-206ENST00000476045 IFNA4P05014 189 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 ACAA1P09110 424 aaPredicted RBP3.4□□□□□ -1.87
VPS13D-206ENST00000476045 IAPPP10997 89 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 FOLR2P14207 255 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 ATP6V0CP27449 155 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 SAA4P35542 130 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 MEOX2P50222 304 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 RND3P61587 244 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 SRPXP78539 464 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 RUNX1Q01196 453 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 TMEM267Q0VDI3 215 aaPredicted RBP3.4□□□□□ -1.87
VPS13D-206ENST00000476045 HERPUD1Q15011 391 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 IZUMO4Q1ZYL8 232 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 LRRC75BQ2VPJ9 315 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms