RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 A0A1B0GW64 132 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 TRDV1A0A1B0GX56 115 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 SMIM30A4D0T7 59 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 MPTX1A8MV57 137 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 SULT1C2O00338 296 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 UPK2O00526 184 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 IGLV2-14P01704 120 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 EIF4EP06730 217 aaKnown RBP10.24□□□□□ -0.77
EPCAM-205ENST00000474691 OR13C7P0DN81 318 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 FXYD4P59646 89 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 AADACL3Q5VUY0 350 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 BEST4Q8NFU0 473 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 GATAD1Q8WUU5 269 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 BORCS5Q969J3 196 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 GPHA2Q96T91 129 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 CSTL1Q9H114 145 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 MAP6D1Q9H9H5 199 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 HYDINQ4G0P3 5121 aa10.24□□□□□ -0.77
EPCAM-205ENST00000474691 NOTOA8MTQ0 251 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 YIF1AO95070 293 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 CTSDP07339 412 aaPredicted RBP10.23□□□□□ -0.77
EPCAM-205ENST00000474691 TFPI2P48307 235 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 AQP4P55087 323 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 PAFAH1B2P68402 229 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 MSMO1Q15800 293 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 TBCEQ15813 527 aaPredicted RBP10.23□□□□□ -0.77
EPCAM-205ENST00000474691 KLK9Q2XQG4 91 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 GDPD1Q8N9F7 314 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 OR51H1Q8NH63 302 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 KRTAP17-1Q9BYP8 105 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 TMEM140Q9NV12 185 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 NDUFB11Q9NX14 153 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 C21orf62Q9NYP8 219 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 DAPK2Q9UIK4 370 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 KLK9Q9UKQ9 250 aa10.23□□□□□ -0.77
EPCAM-205ENST00000474691 IGKV3-7A0A075B6H7 116 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 IGHV3-21A0A0B4J1V1 117 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 IGLC7A0M8Q6 106 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 RBFOX2O43251 390 aaKnown RBP eCLIP10.22□□□□□ -0.77
EPCAM-205ENST00000474691 ZNF207O43670 478 aaKnown RBP10.22□□□□□ -0.77
EPCAM-205ENST00000474691 MRPS14O60783 128 aaKnown RBP10.22□□□□□ -0.77
EPCAM-205ENST00000474691 SNAPC5O75971 98 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 PPYP01298 95 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 FCGR2BP31994 310 aaPredicted RBP10.22□□□□□ -0.77
EPCAM-205ENST00000474691 HERV-K104P61576 105 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 RELQ04864 619 aaPredicted RBP10.22□□□□□ -0.77
EPCAM-205ENST00000474691 ODF3L2Q3SX64 289 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 TMEM17Q86X19 198 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 APRG1Q8IVJ8 170 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 OR1L8Q8NGR8 309 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 C2CD4CQ8TF44 421 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 VCX3BQ9H321 246 aa10.22□□□□□ -0.77
EPCAM-205ENST00000474691 IGHV3OR16-8A0A075B7F1 116 aa10.21□□□□□ -0.77
EPCAM-205ENST00000474691 K7EMT4 169 aa10.21□□□□□ -0.77
EPCAM-205ENST00000474691 NUPL2O15504 423 aaKnown RBP10.21□□□□□ -0.77
EPCAM-205ENST00000474691 SERPINE2P07093 398 aa10.21□□□□□ -0.77
EPCAM-205ENST00000474691 BRWD1-AS2P59051 145 aa10.21□□□□□ -0.77
EPCAM-205ENST00000474691 EIF4EBP1Q13541 118 aaPredicted RBP10.21□□□□□ -0.77
EPCAM-205ENST00000474691 TPRA1Q86W33 373 aa10.21□□□□□ -0.77
EPCAM-205ENST00000474691 OR10W1Q8NGF6 305 aa10.21□□□□□ -0.77
EPCAM-205ENST00000474691 OR11H2Q8NH07 326 aa10.21□□□□□ -0.77
EPCAM-205ENST00000474691 LSM10Q969L4 123 aaKnown RBP10.21□□□□□ -0.77
EPCAM-205ENST00000474691 TMEM56Q96MV1 263 aa10.21□□□□□ -0.77
EPCAM-205ENST00000474691 PLEKHA2Q9HB19 425 aa10.21□□□□□ -0.77
EPCAM-205ENST00000474691 RRP15Q9Y3B9 282 aaKnown RBP10.21□□□□□ -0.77
EPCAM-205ENST00000474691 TRAV18A0A075B6X5 111 aa10.2□□□□□ -0.78
EPCAM-205ENST00000474691 TRAV3A0A0B4J244 114 aa10.2□□□□□ -0.78
EPCAM-205ENST00000474691 CGB1A6NKQ9 187 aa10.2□□□□□ -0.78
EPCAM-205ENST00000474691 C15orf62A8K5M9 175 aa10.2□□□□□ -0.78
EPCAM-205ENST00000474691 DNASE2O00115 360 aaPredicted RBP10.2□□□□□ -0.78
EPCAM-205ENST00000474691 TCTAP57738 103 aa10.2□□□□□ -0.78
EPCAM-205ENST00000474691 NANOS2P60321 138 aaKnown RBP10.2□□□□□ -0.78
EPCAM-205ENST00000474691 TMEM116Q8NCL8 245 aa10.2□□□□□ -0.78
EPCAM-205ENST00000474691 CNBD2Q96M20 576 aa10.2□□□□□ -0.78
EPCAM-205ENST00000474691 ATP6V0BQ99437 205 aa10.2□□□□□ -0.78
EPCAM-205ENST00000474691 DIABLOQ9NR28 239 aa10.2□□□□□ -0.78
EPCAM-205ENST00000474691 COMMD9Q9P000 198 aa10.2□□□□□ -0.78
EPCAM-205ENST00000474691 SSR3Q9UNL2 185 aa10.2□□□□□ -0.78
EPCAM-205ENST00000474691 TEX50A0A1B0GTY4 177 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 SSX5O60225 188 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 S1PR2O95136 353 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 FCER2P06734 321 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 HSPA13P48723 471 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 RPL11P62913 178 aaKnown RBP10.19□□□□□ -0.78
EPCAM-205ENST00000474691 GVQW1Q8N7I0 195 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 LGALS14Q8TCE9 139 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 SCARB1Q8WTV0 552 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 RHPN1-AS1Q9BWJ2 59 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 IFT46Q9NQC8 304 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 RHBDL2Q9NX52 303 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 FKBP11Q9NYL4 201 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 SMPXQ9UHP9 88 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 OR51B2Q9Y5P1 312 aa10.19□□□□□ -0.78
EPCAM-205ENST00000474691 F11RQ9Y624 299 aaKnown RBP10.19□□□□□ -0.78
EPCAM-205ENST00000474691 TRAV14DV4A0A0A6YYC5 116 aa10.18□□□□□ -0.78
EPCAM-205ENST00000474691 IGHV7-4-1A0A0J9YVY3 117 aa10.18□□□□□ -0.78
EPCAM-205ENST00000474691 MARCH11A6NNE9 402 aa10.18□□□□□ -0.78
EPCAM-205ENST00000474691 CA1P00915 261 aaPredicted RBP10.18□□□□□ -0.78
EPCAM-205ENST00000474691 CD5P06127 495 aa10.18□□□□□ -0.78
EPCAM-205ENST00000474691 FGF2P09038 288 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms