RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 LRRN1Q6UXK5 716 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 TMEM161BQ8NDZ6 487 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 TMEM106AQ96A25 262 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 GINS4Q9BRT9 223 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 REG4Q9BYZ8 158 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 CKLFQ9UBR5 152 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 LSM5Q9Y4Y9 91 aaKnown RBP0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 PTPRSQ13332 1948 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 SETD5Q9C0A6 1442 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 ZFHX2Q9C0A1 2572 aaPredicted RBP0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 A0A087WX48 190 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 TMEM212A6NML5 194 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 LRRN3E7EW58 273 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 M0QZ92 97 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 HLA-DRAP01903 254 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 RPS4Y1P22090 263 aaKnown RBP0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 RPL12P30050 165 aaKnown RBP0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 BRS3P32247 399 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 MAGEA2P43356 314 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 TPM4P67936 248 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 KIAA2026Q5HYC2 2103 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 CLVS2Q5SYC1 327 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 ZNF565Q8N9K5 539 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 OR4D11Q8NGI4 311 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 CNBD2Q96M20 576 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 IL36BQ9NZH7 164 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 BAIAP2Q9UQB8 552 aa0.78□□□□□ -2.28
ECHDC1-213ENST00000474240 GLI3P10071 1580 aa0.78□□□□□ -2.29
ECHDC1-213ENST00000474240 CPAMD8Q8IZJ3 1885 aa0.78□□□□□ -2.29
ECHDC1-213ENST00000474240 LST1O00453 97 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 C8orf88P0DMB2 117 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 MARCKSL1P49006 195 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 ZNF345Q14585 488 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 TNFAIP8L3Q5GJ75 292 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 SPANXN5Q5MJ07 72 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 SPANXN3Q5MJ09 141 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 IBA57Q5T440 356 aaKnown RBP0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 C1orf195Q5TG92 126 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 PDPK2PQ6A1A2 396 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 FAM151BQ6UXP7 276 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 DPPA3Q6W0C5 159 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 IQCF2Q8IXL9 164 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 Q8N2B8 174 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 SGMS2Q8NHU3 365 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 SCGB3A1Q96QR1 104 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 MRPS26Q9BYN8 205 aaKnown RBP0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 EFCAB1Q9HAE3 211 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 COQ4Q9Y3A0 265 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 SDK1Q7Z5N4 2213 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
ECHDC1-213ENST00000474240 PCDH15Q96QU1 1955 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 TTC21AQ8NDW8 1320 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 IBA57-AS1B1ANH7 110 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 ACOX3O15254 700 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 DEXIO95424 95 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 PRM2P04554 102 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 MAP2K4P45985 399 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 MLLT11Q13015 90 aaPredicted RBP0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 C1orf194Q5T5A4 169 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 LPCAT3Q6P1A2 487 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 RPL22L1Q6P5R6 122 aaKnown RBP0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 DEFB128Q7Z7B8 93 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 PHF13Q86YI8 300 aaPredicted RBP0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 ZNF439Q8NDP4 499 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 AQP3Q92482 292 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 OPTNQ96CV9 577 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 COMMD5Q9GZQ3 224 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 IMP3Q9NV31 184 aaKnown RBP0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 KLK9Q9UKQ9 250 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 LHFPL6Q9Y693 200 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 GREB1Q4ZG55 1949 aa0.76□□□□□ -2.29
ECHDC1-213ENST00000474240 DCCP43146 1447 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 C9orf84Q5VXU9 1444 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 TONSLQ96HA7 1378 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 TRBV20OR9-2A0A075B6H5 130 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 TRBV6-7A0A0A0MS04 114 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 CLDN25C9JDP6 229 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 ASAH2BP0C7U1 165 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 CCL5P13501 91 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 HIST1H2BOP23527 126 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 HIST1H2BBP33778 126 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 HIST1H2BDP58876 126 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 HIST1H2BCP62807 126 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 HIST2H2BEQ16778 126 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 ZNF550Q7Z398 422 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 OOSP2Q86WS3 158 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 GID4Q8IVV7 300 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 C10orf67Q8IYJ2 551 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 OR4E2Q8NGC2 313 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 RASSF5Q8WWW0 418 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 HIST1H2BHQ93079 126 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 HIST1H2BNQ99877 126 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 HIST1H2BMQ99879 126 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 C22orf24Q9Y442 160 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 CUL9Q8IWT3 2517 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 BRWD1Q9NSI6 2320 aa0.75□□□□□ -2.29
ECHDC1-213ENST00000474240 MALRD1Q5VYJ5 2156 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 RIC1Q4ADV7 1423 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms