RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 LRRC37AA6NMS7 1700 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 ABCA3Q99758 1704 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 COL18A1P39060 1754 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 ANKRD36A6QL64 1941 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 TRBV6-7A0A0A0MS04 114 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 CENPVL3A0A0U1RRI6 287 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 A0A1B0GW64 132 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 SSC5DA1L4H1 1573 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 TMEM150BA6NC51 233 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 IQCF5A8MTL0 148 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 PPP5D1E7EU14 171 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 M0R1X1 148 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 BHLHE40O14503 412 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 FOXH1O75593 365 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 CPSF4O95639 269 aaKnown RBP2.72□□□□□ -1.97
BRCA1-212ENST00000473961 IFNA21P01568 189 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 CTXN2P0C2S0 81 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 NBEAP1P0C6P0 100 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 AKAIN1P0CW23 69 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 HSD11B1P28845 292 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 BRS3P32247 399 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 SULT1A2P50226 295 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 STC1P52823 247 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 MAXP61244 160 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 RPL19P84098 196 aaKnown RBP2.72□□□□□ -1.97
BRCA1-212ENST00000473961 H3F3AP84243 136 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 SHHQ15465 462 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 TNXAQ16473 311 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 SLC25A35Q3KQZ1 300 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 KHDRBS2Q5VWX1 349 aaKnown RBP2.72□□□□□ -1.97
BRCA1-212ENST00000473961 TNFAIP8L2Q6P589 184 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-212ENST00000473961 TMEM205Q6UW68 189 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 IGFL2Q6UWQ7 119 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 NTM-AS1Q6ZSK4 140 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 CLEC20AQ6ZU45 233 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 GRINAQ7Z429 371 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 WDR86Q86TI4 376 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 DEFB106AQ8N104 65 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 SLC35G3Q8N808 338 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 OR2M7Q8NG81 312 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 OR1L1Q8NH94 360 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 OR2V1Q8NHB1 315 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 ASB17Q8WXJ9 295 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 SMIM12Q96EX1 92 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 IP6K3Q96PC2 410 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 PHB2Q99623 299 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 PRRT1Q99946 306 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 CHCHD7Q9BUK0 85 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 PBDC1Q9BVG4 233 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 GGTLC1Q9BX51 225 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 PARD6GQ9BYG4 376 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-212ENST00000473961 FGF23Q9GZV9 251 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-212ENST00000473961 PCBD2Q9H0N5 130 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 SLC35B3Q9H1N7 401 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 RDH14Q9HBH5 336 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 NRXN2Q9P2S2 1712 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 DKKL1Q9UK85 242 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 KLK12Q9UKR0 248 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 ANGPT4Q9Y264 503 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 HDGFL3Q9Y3E1 203 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 SNX10Q9Y5X0 201 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 TSC2P49815 1807 aa2.72□□□□□ -1.97
BRCA1-212ENST00000473961 PATJQ8NI35 1801 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 TMEM235A6NFC5 223 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 B4DEV8 164 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 UMAD1C9J7I0 102 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 C9JQL5 133 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 H0YJW9 148 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 J3QRE1 110 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 J3QT63 122 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 OR2J2O76002 312 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 SOX14O95416 240 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 CYB5R3P00387 301 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-212ENST00000473961 HLA-DQB2P05538 268 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 TRGC1P0CF51 173 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 ATF1P18846 271 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 CD34P28906 385 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 IL12BP29460 328 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 OR10J1P30954 320 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 SNCAP37840 140 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 OPRK1P41145 380 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 AKR1C3P42330 323 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 GALR1P47211 349 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 CAPZBP47756 277 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 OR1E2P47887 323 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 CXCL12P48061 93 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 GABRA4P48169 554 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 CDC34P49427 236 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-212ENST00000473961 UBE2G2P60604 165 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 PFN3P60673 137 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 ACTBP60709 375 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 ACTG1P63261 375 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 FAM3AP98173 230 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 ZNF616Q08AN1 781 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 ELOBQ15370 118 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 TAF9Q16594 264 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 ACSM3Q53FZ2 586 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 TTC32Q5I0X7 151 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 ACTL10Q5JWF8 245 aa2.71□□□□□ -1.98
BRCA1-212ENST00000473961 TMEM69Q5SWH9 247 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms