RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 SETD2Q9BYW2 2564 aaPredicted RBP13.29□□□□□ -0.28
CCM2-205ENST00000472223 PSMB11A5LHX3 300 aa13.29□□□□□ -0.28
CCM2-205ENST00000472223 LINC01548A6NM66 108 aa13.29□□□□□ -0.28
CCM2-205ENST00000472223 LY86O95711 162 aa13.29□□□□□ -0.28
CCM2-205ENST00000472223 DEFA4P12838 97 aa13.29□□□□□ -0.28
CCM2-205ENST00000472223 SNCAP37840 140 aa13.29□□□□□ -0.28
CCM2-205ENST00000472223 SUB1P53999 127 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCM2-205ENST00000472223 RRAS2P62070 204 aaPredicted RBP13.29□□□□□ -0.28
CCM2-205ENST00000472223 TNFRSF9Q07011 255 aa13.29□□□□□ -0.28
CCM2-205ENST00000472223 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.29□□□□□ -0.28
CCM2-205ENST00000472223 LINC01006Q8NI28 216 aa13.29□□□□□ -0.28
CCM2-205ENST00000472223 OR10C1Q96KK4 312 aa13.29□□□□□ -0.28
CCM2-205ENST00000472223 HEYLQ9NQ87 328 aaPredicted RBP13.29□□□□□ -0.28
CCM2-205ENST00000472223 ZNF355PQ9NSJ1 428 aa13.29□□□□□ -0.28
CCM2-205ENST00000472223 LINC00527Q9UJ94 153 aa13.29□□□□□ -0.28
CCM2-205ENST00000472223 TNCP24821 2201 aa13.29□□□□□ -0.28
CCM2-205ENST00000472223 PLXNB1O43157 2135 aa13.28□□□□□ -0.28
CCM2-205ENST00000472223 HAX1O00165 279 aa13.28□□□□□ -0.28
CCM2-205ENST00000472223 NXPH3O95157 252 aa13.28□□□□□ -0.28
CCM2-205ENST00000472223 OR13C7P0DN81 318 aa13.28□□□□□ -0.28
CCM2-205ENST00000472223 MYOD1P15172 320 aa13.28□□□□□ -0.28
CCM2-205ENST00000472223 CRIP2P52943 208 aaPredicted RBP13.28□□□□□ -0.28
CCM2-205ENST00000472223 RPP30P78346 268 aaKnown RBP13.28□□□□□ -0.28
CCM2-205ENST00000472223 AARDQ4LEZ3 155 aa13.28□□□□□ -0.28
CCM2-205ENST00000472223 TMEM65Q6PI78 240 aa13.28□□□□□ -0.28
CCM2-205ENST00000472223 Q6ZNX1 250 aa13.28□□□□□ -0.28
CCM2-205ENST00000472223 NOL4LQ96MY1 436 aaPredicted RBP13.28□□□□□ -0.28
CCM2-205ENST00000472223 CIB3Q96Q77 187 aaPredicted RBP13.28□□□□□ -0.28
CCM2-205ENST00000472223 SERTAD4Q9NUC0 356 aa13.28□□□□□ -0.28
CCM2-205ENST00000472223 HSPB7Q9UBY9 170 aa13.28□□□□□ -0.28
CCM2-205ENST00000472223 NF1P21359 2839 aa13.27□□□□□ -0.28
CCM2-205ENST00000472223 HMX3A6NHT5 357 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 MPTX1A8MV57 137 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 PITX3O75364 302 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 RLN2P04090 185 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 APELAP0DMC3 54 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 PVALBP20472 110 aaPredicted RBP13.27□□□□□ -0.29
CCM2-205ENST00000472223 RIPPLY3P57055 190 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 NDPQ00604 133 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 TMEM95Q3KNT9 176 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 TEX38Q6PEX7 206 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 NOXA1Q86UR1 476 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 COMMD1Q8N668 190 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 OR5T1Q8NG75 326 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 OR1L6Q8NGR2 347 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 NMES1Q9C002 83 aa13.27□□□□□ -0.29
CCM2-205ENST00000472223 TMEM89A2RUT3 159 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 G3V318 75 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 L7N2F9 121 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 SYNGR2O43760 224 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 SIX6O95475 246 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 EGR2P11161 476 aaPredicted RBP13.26□□□□□ -0.29
CCM2-205ENST00000472223 MDKP21741 143 aaPredicted RBP13.26□□□□□ -0.29
CCM2-205ENST00000472223 PSMB6P28072 239 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 VAMP2P63027 116 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 SSBP2P81877 361 aaPredicted RBP13.26□□□□□ -0.29
CCM2-205ENST00000472223 PDLIM3Q53GG5 364 aaPredicted RBP13.26□□□□□ -0.29
CCM2-205ENST00000472223 SPINK9Q5DT21 86 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 CXorf66Q5JRM2 361 aaPredicted RBP13.26□□□□□ -0.29
CCM2-205ENST00000472223 TTC9CQ8N5M4 171 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 OR10W1Q8NGF6 305 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 OR4X2Q8NGF9 303 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 OR4D5Q8NGN0 318 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 DTD1Q8TEA8 209 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 ASB13Q8WXK3 278 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 TAF15Q92804 592 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCM2-205ENST00000472223 RBKSQ9H477 322 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 THYN1Q9P016 225 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 FBXO7Q9Y3I1 522 aa13.26□□□□□ -0.29
CCM2-205ENST00000472223 TET2Q6N021 2002 aaPredicted RBP13.25□□□□□ -0.29
CCM2-205ENST00000472223 CUBNO60494 3623 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 NPIPB5A8MRT5 1133 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 TEX22C9J3V5 150 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 E7EUB6 86 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 PET100P0DJ07 73 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 HIST1H1BP16401 226 aaKnown RBP13.25□□□□□ -0.29
CCM2-205ENST00000472223 HTR2BP41595 481 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 S100A10P60903 97 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 ID3Q02535 119 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 FCN2Q15485 313 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 C2orf68Q2NKX9 166 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 KLHDC1Q8N7A1 406 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 FAM110DQ8TAY7 271 aaPredicted RBP13.25□□□□□ -0.29
CCM2-205ENST00000472223 C19orf24Q9BVV8 132 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 MAGT1Q9H0U3 335 aa13.25□□□□□ -0.29
CCM2-205ENST00000472223 INS-IGF2F8WCM5 200 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 H3BUA1 57 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 IFNA10P01566 189 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 REG1AP05451 166 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 PF4V1P10720 104 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 AREGP15514 252 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 KRTAP24-1Q3LI83 254 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 ZNF329Q86UD4 541 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 OR5AU1Q8NGC0 362 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 RAB40CQ96S21 281 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 ZNF436Q9C0F3 470 aaPredicted RBP13.24□□□□□ -0.29
CCM2-205ENST00000472223 SLA2Q9H6Q3 261 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 LSM5Q9Y4Y9 91 aaKnown RBP13.24□□□□□ -0.29
CCM2-205ENST00000472223 U3KQ87 197 aa13.24□□□□□ -0.29
CCM2-205ENST00000472223 IGLC7A0M8Q6 106 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms