RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 LOXL4Q96JB6 756 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 CRIM1Q9NZV1 1036 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 TRAV1-1A0A0B4J248 108 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 FAM157AC9JC47 383 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 TNFSF15O95150 251 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 MEOX1P50221 254 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 RND2P52198 227 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 MPV17L2Q567V2 206 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 C1orf174Q8IYL3 243 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 CCL17Q92583 94 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 C18orf15Q96N68 181 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■■■□ 21.2
HDAC7-219ENST00000470668 CKS2P33552 79 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 CA7P43166 264 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 IL11RAQ14626 422 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 C10orf128Q5T292 105 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 MIR17HGQ75NE6 70 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 WFDC3Q8IUB2 231 aa12.01□□□□□ -0.49
HDAC7-219ENST00000470668 DNPH1O43598 174 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 PRRX1P54821 245 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 ACTL10Q5JWF8 245 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 SARAFQ96BY9 339 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 J3KRW8 73 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 PFN1P07737 140 aaKnown RBP12□□□□□ -0.49
HDAC7-219ENST00000470668 EAF1Q96JC9 268 aaPredicted RBP12□□□□□ -0.49
HDAC7-219ENST00000470668 C12orf77C9JDV5 145 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 WNT9BO14905 357 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 RBFOX2O43251 390 aaKnown RBP eCLIP12□□□□□ -0.497e-7■■■■□ 24
HDAC7-219ENST00000470668 C3orf79P0CE67 100 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 COX7A1P24310 79 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 TIMP3P35625 211 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 CDKN1AP38936 164 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 HBBP68871 147 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 RIPPLY2Q5TAB7 128 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 VSTM2AQ8TAG5 236 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 MUC21A0A0G2JKD1 596 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 MUC21A0A140T8X8 626 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 RAMP3O60896 148 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 MUC21Q5SSG8 566 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 FLVCR1-AS1Q8TAF5 88 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 SLC25A33Q9BSK2 321 aa12□□□□□ -0.49
HDAC7-219ENST00000470668 TMEM265A0A087WTH1 108 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 C7orf71A4D174 169 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 TMEM210A6NLX4 147 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 K7ESF4 209 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 HYPMO75409 117 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 HIGD1CA8MV81 97 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 NDUFB3O43676 98 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 COL4A6Q14031 1691 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 IGHV3-72A0A0B4J1Y9 119 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 IGHV5-10-1A0A0J9YXX1 117 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 SYNGR3O43761 229 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 PSG1P11464 419 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 ACP1P24666 158 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 GPR183P32249 361 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 MPV17P39210 176 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 TNFAIP6P98066 277 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-219ENST00000470668 RPL39P5Q59GN2 51 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 ZNF502Q8TBZ5 544 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 HIST1H4GQ99525 98 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 DCTN5Q9BTE1 182 aa11.99□□□□□ -0.49
HDAC7-219ENST00000470668 PPIHO43447 177 aaKnown RBP11.98□□□□□ -0.49
HDAC7-219ENST00000470668 RELQ04864 619 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-219ENST00000470668 NMSQ5H8A3 153 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 LYRM7Q5U5X0 104 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 NPIPB3Q92617 1050 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 CDX2Q99626 313 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-219ENST00000470668 ELOVL5Q9NYP7 299 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 TRAV8-6A0A0B4J262 113 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 H7C2G1 150 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 TIAF1O95411 115 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 TBR1Q16650 682 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 ABCA4P78363 2273 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 A0A0G2JRQ6 117 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 IFNL4K9M1U5 179 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 TMEM50AO95807 157 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 MYOZ3Q8TDC0 251 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 PRDM14Q9GZV8 571 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 PLXND1Q9Y4D7 1925 aa11.98□□□□□ -0.49
HDAC7-219ENST00000470668 IGKV3D-11A0A0A0MRZ8 115 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 CCL1P22362 96 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 UCP2P55851 309 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 FBXW9Q5XUX1 488 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 TMEM136Q6ZRR5 245 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 DNM1P46Q6ZS02 220 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 TCF24Q7RTU0 167 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 SNRNP40Q96DI7 357 aaKnown RBP11.97□□□□□ -0.49
HDAC7-219ENST00000470668 RASL11BQ9BPW5 248 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 IGKV1-27A0A075B6S5 117 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 F5H697 171 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 APOHP02749 345 aaPredicted RBP11.97□□□□□ -0.49
HDAC7-219ENST00000470668 FOXL1Q12952 345 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 TWIST1Q15672 202 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 NCBP2LA6PVI3 153 aaKnown RBP11.97□□□□□ -0.49
HDAC7-219ENST00000470668 LTBRP36941 435 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 SAXO1Q8IYX7 474 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 RPEQ96AT9 228 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 MCRIP2Q9BUT9 160 aaKnown RBP11.97□□□□□ -0.49
HDAC7-219ENST00000470668 ARHGAP21Q5T5U3 1957 aa11.97□□□□□ -0.49
HDAC7-219ENST00000470668 TYMSP04818 313 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms