RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 MC5RP33032 325 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 Q0VG73 95 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 MRPL21Q7Z2W9 205 aaKnown RBP6.62□□□□□ -1.35
TPM3-215ENST00000469717 C17orf82Q86X59 251 aaPredicted RBP6.62□□□□□ -1.35
TPM3-215ENST00000469717 TPRX1Q8N7U7 411 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 TSKUQ8WUA8 353 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 SSBP3Q9BWW4 388 aaPredicted RBP6.62□□□□□ -1.35
TPM3-215ENST00000469717 SPENQ96T58 3664 aaKnown RBP6.62□□□□□ -1.35
TPM3-215ENST00000469717 ACTL6BO94805 426 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 CELA3BP08861 270 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 RFPL3SP0C7P2 107 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 CD24P25063 80 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 ARF1P84077 181 aaKnown RBP6.61□□□□□ -1.35
TPM3-215ENST00000469717 KRTAP27-1Q3LI81 207 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 EBLN2Q6P2I7 272 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 OR52L2PQ8NGH6 319 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 SAP25Q8TEE9 199 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 SFXN3Q9BWM7 321 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 A0A1W2PR77 199 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 ZNF716A6NP11 495 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 NBEAP1P0C6P0 100 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 LIFP15018 202 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 CD1BP29016 333 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 GPR6P46095 362 aaPredicted RBP6.61□□□□□ -1.35
TPM3-215ENST00000469717 FOXE3Q13461 319 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 LTC4SQ16873 150 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 RPEL1Q2QD12 228 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 CEACAM21Q3KPI0 293 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 ATP1A1-AS1Q5TC04 95 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 TMEM136Q6ZRR5 245 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 FAM58AQ8N1B3 248 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 CNEP1R1Q8N9A8 125 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 CPT1CQ8TCG5 803 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 BET1LQ9NYM9 111 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 C10orf142B7Z368 130 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 DEGS1O15121 323 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 CGAP01215 116 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 PF4V1P10720 104 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 RIPPLY3P57055 190 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 PQLC2Q6ZP29 291 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 FAM168AQ92567 244 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 EAF1Q96JC9 268 aaPredicted RBP6.61□□□□□ -1.35
TPM3-215ENST00000469717 C1QTNF5Q9BXJ0 243 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 CST9LQ9H4G1 147 aa6.61□□□□□ -1.35
TPM3-215ENST00000469717 LINC00473A8K010 186 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 TNFSF4P23510 183 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 TNXAQ16473 311 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 BHLHA15Q7RTS1 189 aaPredicted RBP6.6□□□□□ -1.35
TPM3-215ENST00000469717 MGST2Q99735 147 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 DEFB127Q9H1M4 99 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.6□□□□□ -1.358e-7■■■■□ 20.9
TPM3-215ENST00000469717 IGLC7A0M8Q6 106 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 SAP30O75446 220 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 GATA2P23769 480 aaPredicted RBP6.6□□□□□ -1.35
TPM3-215ENST00000469717 CRYBB3P26998 211 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 ARF6P62330 175 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 CENPWQ5EE01 88 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 WFDC8Q8IUA0 241 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 ABHD12Q8N2K0 398 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 RFESDQ8TAC1 157 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 SPSB4Q96A44 273 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 SSBP4Q9BWG4 385 aaPredicted RBP6.6□□□□□ -1.35
TPM3-215ENST00000469717 CHRNA10Q9GZZ6 450 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 MS4A5Q9H3V2 200 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 SERTAD4Q9NUC0 356 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 TECRQ9NZ01 308 aaKnown RBP6.6□□□□□ -1.35
TPM3-215ENST00000469717 CSPG4Q6UVK1 2322 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 WNK2Q9Y3S1 2297 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 IGHV2-26A0A0B4J1V2 119 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A10PA6NDY2 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A18PA6NE21 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A16PA6NEW6 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A20PA6NIJ5 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A8PA6NJQ4 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A7PA6NKC0 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A22PA8MWA6 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A12PA8MX19 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A5PA8MXJ8 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A23PA8MXZ1 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 OR2H2O95918 312 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 OR9G9P0C7N8 305 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A15PP0C7V4 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A13PP0C7W8 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A14PP0C7W9 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FAM90A24PP0C7X0 464 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 FTH1P19P0C7X4 201 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 OCIAD2Q56VL3 154 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 WIPI1Q5MNZ9 446 aaPredicted RBP6.6□□□□□ -1.35
TPM3-215ENST00000469717 TREML4Q6UXN2 200 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 LINC00173Q6ZV60 143 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.6□□□□□ -1.35
TPM3-215ENST00000469717 CDC42EP3Q9UKI2 254 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 WDR83OSQ9Y284 106 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 KALRNO60229 2985 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 IGLV3-12A0A075B6K2 115 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 ZNF891A8MT65 544 aaPredicted RBP6.6□□□□□ -1.35
TPM3-215ENST00000469717 NEURL1O76050 574 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 CA7P43166 264 aa6.6□□□□□ -1.35
TPM3-215ENST00000469717 SRSF7Q16629 238 aaKnown RBP eCLIP6.6□□□□□ -1.353e-11■■■■□ 20.4
TPM3-215ENST00000469717 ZNF718Q3SXZ3 478 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms