RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 RAC2P15153 192 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 EGR1P18146 543 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 CTRLP40313 264 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 LGALS4P56470 323 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 OR5I1Q13606 314 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 C1orf185Q5T7R7 199 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 FBXW9Q5XUX1 488 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 VN1R17PQ8TDU5 208 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 C11orf52Q96A22 123 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 FOXC2Q99958 501 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 GNB1LQ9BYB4 327 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 ZNF703Q9H7S9 590 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-205ENST00000469550 B4GALT7Q9UBV7 327 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 POLDIP2Q9Y2S7 368 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 NCKAP5O14513 1909 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 TRAV39A0A0B4J263 110 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 A0A0G2JNJ9 132 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 FAM90A9PA6NNJ1 464 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 SH2D1BO14796 132 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 S1PR2O95136 353 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 MT-ND6P03923 174 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 RFPL3SP0C7P2 107 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 CBLN1P23435 193 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 CDKN1AP38936 164 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 PCP4P48539 62 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 BRWD1-AS2P59051 145 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 UBE2G2P60604 165 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 RPL30P62888 115 aaKnown RBP7.93□□□□□ -1.14
HDAC3-205ENST00000469550 RPP30P78346 268 aaKnown RBP7.93□□□□□ -1.14
HDAC3-205ENST00000469550 PLP2Q04941 152 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 OR10J3Q5JRS4 329 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 WIPI1Q5MNZ9 446 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-205ENST00000469550 DMRTA1Q5VZB9 504 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 H2BFWTQ7Z2G1 175 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 MYPOPQ86VE0 399 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-205ENST00000469550 BAGE3Q86Y29 109 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 BAGE2Q86Y30 109 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 C1orf174Q8IYL3 243 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 SIGLECL1Q8N7X8 197 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 Q8N976 141 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 ZDHHC16Q969W1 377 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 SLC35E1Q96K37 410 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 TMUB1Q9BVT8 246 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 SAMD10Q9BYL1 202 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 ZNF586Q9NXT0 402 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 Q9UFV3 132 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 BOKQ9UMX3 212 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-205ENST00000469550 A0A096LPE4 126 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 TRGV10A0A0A0MS01 117 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 TRGV5A0A0B4J1U4 118 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 TRAV38-1A0A0B4J264 116 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 A0A1W2PPZ6 126 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 PGPEP1LA6NFU8 196 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 SIRPB1O00241 398 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 CDIPTO14735 213 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 SIAH2O43255 324 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 IGHV3-9P01782 118 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 CELA3AP09093 270 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 CD33P20138 364 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 RAB7AP51149 207 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 TGFBR3Q03167 851 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 ZNF816Q0VGE8 651 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-205ENST00000469550 ZNF718Q3SXZ3 478 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 FBXL19-AS1Q494R0 122 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 WDR73Q6P4I2 378 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 ARL6IP6Q8N6S5 226 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 OR1L6Q8NGR2 347 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 GALMQ96C23 342 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 RTL8AQ9BWD3 113 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 SFXN3Q9BWM7 321 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 OR2D2Q9H210 308 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 SPRR3Q9UBC9 169 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 UQCR10Q9UDW1 63 aa7.92□□□□□ -1.14
HDAC3-205ENST00000469550 PRRC2AP48634 2157 aaKnown RBP7.92□□□□□ -1.14
HDAC3-205ENST00000469550 ZNF503-AS2A6NEH8 195 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 C17orf98A8MV24 154 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 FCN1O00602 326 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 TRAPPC6AO75865 159 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 OR10J4P0C629 311 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 AREGP15514 252 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 SPATA46Q5T0L3 261 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 ORAOV1Q8WV07 137 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 C5orf30Q96GV9 206 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 ARL2-SNX15V9GYD0 113 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 SCO2A0A1W2PP80 73 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 TMEM30CPA0ZSE6 113 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 OOEPA6NGQ2 149 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 DIRC3C9JPN6 131 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 J3QW42 95 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 ARL14EPLP0DKL9 152 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 DEFA4P12838 97 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 CA6P23280 308 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 RPEL1Q2QD12 228 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 HLA-DRB5Q30154 266 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 PDLIM3Q53GG5 364 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-205ENST00000469550 GCSAMLQ5JQS6 135 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 SLC35E4Q6ICL7 350 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 LRP11Q86VZ4 500 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 C11orf42Q8N5U0 333 aa7.91□□□□□ -1.14
HDAC3-205ENST00000469550 OR52E5Q8NH55 327 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms