RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 CX3CL1P78423 397 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 SRSF2Q01130 221 aaKnown RBP6.44□□□□□ -1.38
HDAC6-216ENST00000468949 PJVKQ0ZLH3 352 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 FCN2Q15485 313 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 LRRC37A5PQ49AS3 106 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 Q6ZNX1 250 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 HSD17B13Q7Z5P4 300 aaPredicted RBP6.44□□□□□ -1.38
HDAC6-216ENST00000468949 ZNF429Q86V71 674 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 ZBTB8BQ8NAP8 495 aaPredicted RBP6.44□□□□□ -1.38
HDAC6-216ENST00000468949 OR4F5Q8NH21 305 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 ASB13Q8WXK3 278 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 CIB3Q96Q77 187 aaPredicted RBP6.44□□□□□ -1.38
HDAC6-216ENST00000468949 HSPB9Q9BQS6 159 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 GON7Q9BXV9 100 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 PLSCR3Q9NRY6 295 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 LSM5Q9Y4Y9 91 aaKnown RBP6.44□□□□□ -1.38
HDAC6-216ENST00000468949 MXRA5Q9NR99 2828 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 MSGN1A6NI15 193 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 FCN1O00602 326 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 SSSCA1O60232 199 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 LY86O95711 162 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 IGHG2P01859 326 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 P0C879 139 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 APELAP0DMC3 54 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 DEFA4P12838 97 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 SNCAP37840 140 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 HSPE1P61604 102 aaKnown RBP6.43□□□□□ -1.38
HDAC6-216ENST00000468949 BLCAPP62952 87 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 ERHP84090 104 aaKnown RBP6.43□□□□□ -1.38
HDAC6-216ENST00000468949 PRCDQ00LT1 54 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 TNFRSF9Q07011 255 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 FGL1Q08830 312 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 SPINK9Q5DT21 86 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 C10orf55Q5SWW7 151 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 UNQ5815/PRO19632Q6UWF5 114 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 OR52E5Q8NH55 327 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 DTD1Q8TEA8 209 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 TMEM68Q96MH6 324 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 SRSF8Q9BRL6 282 aaKnown RBP6.43□□□□□ -1.38
HDAC6-216ENST00000468949 FAM103A1Q9BTL3 118 aaKnown RBP6.43□□□□□ -1.38
HDAC6-216ENST00000468949 NMES1Q9C002 83 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 ZNF436Q9C0F3 470 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-216ENST00000468949 HEYLQ9NQ87 328 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-216ENST00000468949 ZNF355PQ9NSJ1 428 aa6.43□□□□□ -1.38
HDAC6-216ENST00000468949 PAIP2BQ9ULR5 123 aaKnown RBP6.43□□□□□ -1.38
HDAC6-216ENST00000468949 TRAV41A0A0B4J266 112 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 TEX50A0A1B0GTY4 177 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 HMX3A6NHT5 357 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 MPTX1A8MV57 137 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 IFNA10P01566 189 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 AMY1AP04745 511 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 GIPP09681 153 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-216ENST00000468949 OR13C7P0DN81 318 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 IAPPP10997 89 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 MYOD1P15172 320 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 BCAP31P51572 246 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 SUB1P53999 127 aaKnown RBP eCLIP6.42□□□□□ -1.38
HDAC6-216ENST00000468949 RAP2BP61225 183 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 RPL23AP62750 156 aaKnown RBP6.42□□□□□ -1.38
HDAC6-216ENST00000468949 NDPQ00604 133 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 CD83Q01151 205 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 AKAP14Q86UN6 197 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 NOXA1Q86UR1 476 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 STPG2Q8N412 459 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-216ENST00000468949 OR4D5Q8NGN0 318 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 SGMS2Q8NHU3 365 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 OR10C1Q96KK4 312 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 MAGT1Q9H0U3 335 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 RBKSQ9H477 322 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 ZNF702PQ9H963 129 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 HSPB7Q9UBY9 170 aa6.42□□□□□ -1.38
HDAC6-216ENST00000468949 PSMB11A5LHX3 300 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 SYNGR2O43760 224 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 CCNKO75909 580 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 NDUFA7O95182 113 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 GHRHP01286 108 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 REG1AP05451 166 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 IL6RP08887 468 aaPredicted RBP6.41□□□□□ -1.38
HDAC6-216ENST00000468949 OR8U8P0C7N1 319 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 NUP62P37198 522 aaPredicted RBP6.41□□□□□ -1.38
HDAC6-216ENST00000468949 CAV2P51636 162 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 H2BFSP57053 126 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 POLR2GP62487 172 aaKnown RBP eCLIP6.41□□□□□ -1.38
HDAC6-216ENST00000468949 RAB11AP62491 216 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 C2orf68Q2NKX9 166 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 TMEM95Q3KNT9 176 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 CXorf66Q5JRM2 361 aaPredicted RBP6.41□□□□□ -1.38
HDAC6-216ENST00000468949 KHDC1LQ5JSQ8 128 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 TMEM65Q6PI78 240 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 Q6ZRM9 215 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 Q6ZSV7 163 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 CENPVQ7Z7K6 275 aaPredicted RBP6.41□□□□□ -1.38
HDAC6-216ENST00000468949 LFNGQ8NES3 379 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 SLC24A4Q8NFF2 622 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 OR11H7Q8NGC8 314 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 OR4X2Q8NGF9 303 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 OR1L6Q8NGR2 347 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 THAP6Q8TBB0 222 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms