RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 IFT46Q9NQC8 304 aa15.72■□□□□ 0.11
COL9A3-207ENST00000467819 OR2T8A6NH00 312 aa15.71■□□□□ 0.11
COL9A3-207ENST00000467819 TGOLN2O43493 480 aa15.71■□□□□ 0.11
COL9A3-207ENST00000467819 OR13C7P0DN81 318 aa15.71■□□□□ 0.11
COL9A3-207ENST00000467819 ELLP55199 621 aaPredicted RBP15.71■□□□□ 0.11
COL9A3-207ENST00000467819 ERVK-16P61578 105 aa15.71■□□□□ 0.11
COL9A3-207ENST00000467819 NEDD8Q15843 81 aa15.71■□□□□ 0.11
COL9A3-207ENST00000467819 GDPD1Q8N9F7 314 aa15.71■□□□□ 0.11
COL9A3-207ENST00000467819 CD300LFQ8TDQ1 290 aa15.71■□□□□ 0.11
COL9A3-207ENST00000467819 ZNF436Q9C0F3 470 aaPredicted RBP15.71■□□□□ 0.11
COL9A3-207ENST00000467819 EHFQ9NZC4 300 aa15.71■□□□□ 0.11
COL9A3-207ENST00000467819 COMMD9Q9P000 198 aa15.71■□□□□ 0.11
COL9A3-207ENST00000467819 UBQLN2Q9UHD9 624 aa15.71■□□□□ 0.11
COL9A3-207ENST00000467819 IGHV3-21A0A0B4J1V1 117 aa15.7■□□□□ 0.1
COL9A3-207ENST00000467819 CYB5BO43169 146 aa15.7■□□□□ 0.1
COL9A3-207ENST00000467819 RLN1P04808 185 aa15.7■□□□□ 0.1
COL9A3-207ENST00000467819 TRAPPC2P0DI81 140 aa15.7■□□□□ 0.1
COL9A3-207ENST00000467819 TRAPPC2BP0DI82 140 aa15.7■□□□□ 0.1
COL9A3-207ENST00000467819 GNRHRP30968 328 aa15.7■□□□□ 0.1
COL9A3-207ENST00000467819 SLC25A24Q6NUK1 477 aa15.7■□□□□ 0.1
COL9A3-207ENST00000467819 OR2C3Q8N628 320 aa15.7■□□□□ 0.1
COL9A3-207ENST00000467819 VN1R17PQ8TDU5 208 aa15.7■□□□□ 0.1
COL9A3-207ENST00000467819 TMEM190Q8WZ59 177 aa15.7■□□□□ 0.1
COL9A3-207ENST00000467819 HINT2Q9BX68 163 aa15.7■□□□□ 0.1
COL9A3-207ENST00000467819 TEX50A0A1B0GTY4 177 aa15.69■□□□□ 0.1
COL9A3-207ENST00000467819 SERPINE2P07093 398 aa15.69■□□□□ 0.1
COL9A3-207ENST00000467819 WT1-ASQ06250 92 aa15.69■□□□□ 0.1
COL9A3-207ENST00000467819 PMS2P11Q13670 270 aa15.69■□□□□ 0.1
COL9A3-207ENST00000467819 THOC7Q6I9Y2 204 aaKnown RBP15.69■□□□□ 0.1
COL9A3-207ENST00000467819 SLC38A6Q8IZM9 456 aa15.69■□□□□ 0.1
COL9A3-207ENST00000467819 BORCS5Q969J3 196 aa15.69■□□□□ 0.1
COL9A3-207ENST00000467819 MARCH11A6NNE9 402 aa15.68■□□□□ 0.1
COL9A3-207ENST00000467819 FGF2P09038 288 aa15.68■□□□□ 0.1
COL9A3-207ENST00000467819 RFX2P48378 723 aa15.68■□□□□ 0.1
COL9A3-207ENST00000467819 OR1L8Q8NGR8 309 aa15.68■□□□□ 0.1
COL9A3-207ENST00000467819 SPAG8Q99932 426 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-207ENST00000467819 ZNF2Q9BSG1 426 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-207ENST00000467819 C5orf66Q9H5L9 145 aa15.68■□□□□ 0.1
COL9A3-207ENST00000467819 NSG2Q9Y328 171 aa15.68■□□□□ 0.1
COL9A3-207ENST00000467819 IGHV3OR16-8A0A075B7F1 116 aa15.67■□□□□ 0.1
COL9A3-207ENST00000467819 XRCC3O43542 346 aa15.67■□□□□ 0.1
COL9A3-207ENST00000467819 PMP2P02689 132 aa15.67■□□□□ 0.1
COL9A3-207ENST00000467819 F2RP25116 425 aa15.67■□□□□ 0.1
COL9A3-207ENST00000467819 TGFBR1P36897 503 aa15.67■□□□□ 0.1
COL9A3-207ENST00000467819 MFAP2P55001 183 aa15.67■□□□□ 0.1
COL9A3-207ENST00000467819 HSD17B13Q7Z5P4 300 aaPredicted RBP15.67■□□□□ 0.1
COL9A3-207ENST00000467819 BSCL2Q96G97 398 aaPredicted RBP15.67■□□□□ 0.1
COL9A3-207ENST00000467819 DAZ1Q9NQZ3 744 aaKnown RBP15.67■□□□□ 0.1
COL9A3-207ENST00000467819 A0A0J9YWU9 116 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 CXorf65A6NEN9 183 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 PGLYRP1O75594 196 aaPredicted RBP15.66■□□□□ 0.1
COL9A3-207ENST00000467819 KRASP01116 189 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 LPAR6P43657 344 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 APOC4P55056 127 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 DEFB135Q30KP9 77 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 UBAC2Q8NBM4 344 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 FCAMRQ8WWV6 532 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 LSM10Q969L4 123 aaKnown RBP15.66■□□□□ 0.1
COL9A3-207ENST00000467819 MOB3AQ96BX8 217 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 S100A16Q96FQ6 103 aaKnown RBP15.66■□□□□ 0.1
COL9A3-207ENST00000467819 CHRDL1Q9BU40 450 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 C20orf24Q9BUV8 137 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 NDUFA4L2Q9NRX3 87 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 C21orf62Q9NYP8 219 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 OR51B2Q9Y5P1 312 aa15.66■□□□□ 0.1
COL9A3-207ENST00000467819 F11RQ9Y624 299 aaKnown RBP15.66■□□□□ 0.1
COL9A3-207ENST00000467819 TSPAN4O14817 238 aa15.65■□□□□ 0.1
COL9A3-207ENST00000467819 ZNF207O43670 478 aaKnown RBP15.65■□□□□ 0.1
COL9A3-207ENST00000467819 G6PCP35575 357 aa15.65■□□□□ 0.1
COL9A3-207ENST00000467819 EWSR1Q01844 656 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL9A3-207ENST00000467819 UBE2NLQ5JXB2 153 aa15.65■□□□□ 0.1
COL9A3-207ENST00000467819 LAMTOR1Q6IAA8 161 aa15.65■□□□□ 0.1
COL9A3-207ENST00000467819 DHRS11Q6UWP2 260 aa15.65■□□□□ 0.1
COL9A3-207ENST00000467819 TSPAN14Q8NG11 270 aa15.65■□□□□ 0.1
COL9A3-207ENST00000467819 OR5H2Q8NGV7 314 aa15.65■□□□□ 0.1
COL9A3-207ENST00000467819 LINC00476Q8WZB0 136 aa15.65■□□□□ 0.1
COL9A3-207ENST00000467819 FXYD6Q9H0Q3 95 aa15.65■□□□□ 0.1
COL9A3-207ENST00000467819 NDUFA4O00483 81 aa15.64■□□□□ 0.09
COL9A3-207ENST00000467819 SPRY2O43597 315 aa15.64■□□□□ 0.09
COL9A3-207ENST00000467819 SNAPC5O75971 98 aa15.64■□□□□ 0.09
COL9A3-207ENST00000467819 TAS2R20P59543 309 aa15.64■□□□□ 0.09
COL9A3-207ENST00000467819 ODF3L2Q3SX64 289 aa15.64■□□□□ 0.09
COL9A3-207ENST00000467819 Q56UQ5 140 aa15.64■□□□□ 0.09
COL9A3-207ENST00000467819 TMEM69Q5SWH9 247 aa15.64■□□□□ 0.09
COL9A3-207ENST00000467819 SPSB3Q6PJ21 355 aa15.64■□□□□ 0.09
COL9A3-207ENST00000467819 SCARB1Q8WTV0 552 aa15.64■□□□□ 0.09
COL9A3-207ENST00000467819 DGCR14Q96DF8 476 aaKnown RBP15.64■□□□□ 0.09
COL9A3-207ENST00000467819 ANAPC10Q9UM13 185 aa15.64■□□□□ 0.09
COL9A3-207ENST00000467819 F8W735 103 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-207ENST00000467819 TMEM127O75204 238 aa15.63■□□□□ 0.09
COL9A3-207ENST00000467819 BMI1P35226 326 aa15.63■□□□□ 0.09
COL9A3-207ENST00000467819 Q6ZWC4 215 aa15.63■□□□□ 0.09
COL9A3-207ENST00000467819 LYG2Q86SG7 212 aa15.63■□□□□ 0.09
COL9A3-207ENST00000467819 WFDC3Q8IUB2 231 aa15.63■□□□□ 0.09
COL9A3-207ENST00000467819 CMTM1Q8IZ96 169 aa15.63■□□□□ 0.09
COL9A3-207ENST00000467819 SAMD12Q8N8I0 201 aa15.63■□□□□ 0.09
COL9A3-207ENST00000467819 TP53TG1Q9Y2A0 90 aa15.63■□□□□ 0.09
COL9A3-207ENST00000467819 K7EIM0 57 aa15.62■□□□□ 0.09
COL9A3-207ENST00000467819 GPR31O00270 319 aa15.62■□□□□ 0.09
COL9A3-207ENST00000467819 LY6G6CO95867 125 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms